Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 172 4e-38
seq7870 111 1e-19
seq7786 95.1 1e-14
>seq7767
Length=50048226
Score = 172 bits (190), Expect = 4e-38
Identities = 593/913 (65%), Gaps = 24/913 (3%)
Strand=Plus/Plus
Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086
|| || ||| || ||| || |||||||| || || | ||||| ||| ||| | |||
Sbjct 16035846 GAGCCACTACTGAGAGAAAACCCTCGTCGCTTTGTCATCTTCCCTGTCGGGTACCATGAT 16035905
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| ||||| | || || || |||||||| ||||| | || ||||| ||| |
Sbjct 16035906 ATTTGGCAGATGTATGAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGAGGTGGATCTT 16035965
Query 61147 TCCAAAGACATGAATGACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTAAAC 61204
||||| ||||| | || ||| | | | | | || || || || || ||
Sbjct 16035966 TCCAAGGACATTCAGCACCAGGAATCCCTGAAGCCTGAGGAGAGATACTTTCTATCCCAC 16036025
Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-T 61263
|| |||| |||||||| | || || || || ||||| || || |||| || |
Sbjct 16036026 --GTTCTGGCTTTCTTTGCGCCGAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGGT 16036083
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
|| || || || || || | | || || || |||||||| ||||||| |||||||||
Sbjct 16036084 TTAGC-CAAGAAGTTCAGATTACAGAAGCCCGCTGTTTCTATGGCTTCCGAATTGCCATG 16036142
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383
|| || |||| || |||||||||||| | ||||| || || || | | ||
Sbjct 16036143 GAAAACATCCATTCTGAGATGTACAGTCTCCTCATTGACACTTATGTTAAAGATTCCAAA 16036202
Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443
||| | ||| | ||||| ||| ||||||| || || || ||| ||| || ||
Sbjct 16036203 GAAAGGGAATTTCTCTTCAACGCCCTCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGAC 16036262
Query 61444 TGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCAT 61501
|||||||| |||||| | |||| |||||| | || ||||| | ||| |
Sbjct 16036263 TGGGCCTTGCATTGGA--CTGGGGACAAAGAGGCTACCTACGGGGAACGGGTTGTGGACT 16036320
Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561
|||| | || || || | || || ||| || ||||| | || || ||| | ||||
Sbjct 16036321 TTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGACGATATTCTGGCTCAAGA 16036380
Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGGGC 61620
|||||| || ||||| || | | || ||||| | || || || | || |||||
Sbjct 16036381 AACGTGACCTGATGCCTGGCCCCATGTTTTCCAATGAACTTATTAGCA-GAGATGAGGGT 16036439
Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680
| || ||||| ||||| || | ||||||| | ||||| | || || ||
Sbjct 16036440 TTACACTGTGACTTTGCCTGCCTGATGTTCAAAC---ACCTGGTCCACAAACCTTCCAAG 16036496
Query 61681 GAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGAC 61740
|| | ||| || || || | | || || || || |||| || || || ||
Sbjct 16036497 CAGAGAGTGAAGGAAATAATTATTAATGCCGTTCGGATAGAGCAGGGGTTCCTCACGGAG 16036556
Query 61741 GCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTT 61800
| |||||| | ||||| || |||||||| ||||| ||||| |||||| |||
Sbjct 16036557 ACCTTGCCCCTGAAGCTCATTGGGATGAATTGCACGTTAATGAAGCAGTGTATTGAGTTT 16036616
Query 61801 GTTGCCGACCGTCTGTTGGTCGATTTGGGTAT--GAAGCGGATCTATAATACGAAAAACC 61858
|| || |||| || || | || | ||| | | | | | | | || |||| |
Sbjct 16036617 GTGGCACACCGACTTATGCTGGAGCTAGGTTTTGGCAAGGTTTTCAGAGTA--GAAAATC 16036674
Query 61859 CATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTG 61918
||||||| |||||||| | ||||| ||||| || | || || || ||||| | |
Sbjct 16036675 CATTTGACTTCATGGAGAATATTTCACTGGAAGGGA-----AACTTCTTTGAGAAGAGAG 16036729
Query 61919 TAGGCGACTATCA 61931
|||| || |||||
Sbjct 16036730 TAGGTGAGTATCA 16036742
>seq7870
Length=10551609
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| |||||||| || ||||| || || |||| ||||| ||
Sbjct 10326684 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 10326625
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| ||
Sbjct 10326624 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 10326565
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 10326564 AGACTCAATGATGGCATACCAAAG 10326541
>seq7786
Length=83011774
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
|||||||| || || | ||||| || |||||||| ||||| || ||| ||| ||||||
Sbjct 48125958 CAGGAGGTACAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 48125899
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 48125898 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 48125852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397529857326080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |