Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7767 172 4e-38 seq7870 111 1e-19 seq7786 95.1 1e-14 >seq7767 Length=50048226 Score = 172 bits (190), Expect = 4e-38 Identities = 593/913 (65%), Gaps = 24/913 (3%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 || || ||| || ||| || |||||||| || || | ||||| ||| ||| | ||| Sbjct 16035846 GAGCCACTACTGAGAGAAAACCCTCGTCGCTTTGTCATCTTCCCTGTCGGGTACCATGAT 16035905 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| ||||| | || || || |||||||| ||||| | || ||||| ||| | Sbjct 16035906 ATTTGGCAGATGTATGAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAGAGGTGGATCTT 16035965 Query 61147 TCCAAAGACATGAATGACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTAAAC 61204 ||||| ||||| | || ||| | | | | | || || || || || || Sbjct 16035966 TCCAAGGACATTCAGCACCAGGAATCCCTGAAGCCTGAGGAGAGATACTTTCTATCCCAC 16036025 Query 61205 ATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-T 61263 || |||| |||||||| | || || || || ||||| || || |||| || | Sbjct 16036026 --GTTCTGGCTTTCTTTGCGCCGAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGGT 16036083 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 || || || || || || | | || || || |||||||| ||||||| ||||||||| Sbjct 16036084 TTAGC-CAAGAAGTTCAGATTACAGAAGCCCGCTGTTTCTATGGCTTCCGAATTGCCATG 16036142 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 || || |||| || |||||||||||| | ||||| || || || | | || Sbjct 16036143 GAAAACATCCATTCTGAGATGTACAGTCTCCTCATTGACACTTATGTTAAAGATTCCAAA 16036202 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 ||| | ||| | ||||| ||| ||||||| || || || ||| ||| || || Sbjct 16036203 GAAAGGGAATTTCTCTTCAACGCCCTCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGAC 16036262 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCAT 61501 |||||||| |||||| | |||| |||||| | || ||||| | ||| | Sbjct 16036263 TGGGCCTTGCATTGGA--CTGGGGACAAAGAGGCTACCTACGGGGAACGGGTTGTGGACT 16036320 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 |||| | || || || | || || ||| || ||||| | || || ||| | |||| Sbjct 16036321 TTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGACGATATTCTGGCTCAAGA 16036380 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGGGC 61620 |||||| || ||||| || | | || ||||| | || || || | || ||||| Sbjct 16036381 AACGTGACCTGATGCCTGGCCCCATGTTTTCCAATGAACTTATTAGCA-GAGATGAGGGT 16036439 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680 | || ||||| ||||| || | ||||||| | ||||| | || || || Sbjct 16036440 TTACACTGTGACTTTGCCTGCCTGATGTTCAAAC---ACCTGGTCCACAAACCTTCCAAG 16036496 Query 61681 GAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGAC 61740 || | ||| || || || | | || || || || |||| || || || || Sbjct 16036497 CAGAGAGTGAAGGAAATAATTATTAATGCCGTTCGGATAGAGCAGGGGTTCCTCACGGAG 16036556 Query 61741 GCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTT 61800 | |||||| | ||||| || |||||||| ||||| ||||| |||||| ||| Sbjct 16036557 ACCTTGCCCCTGAAGCTCATTGGGATGAATTGCACGTTAATGAAGCAGTGTATTGAGTTT 16036616 Query 61801 GTTGCCGACCGTCTGTTGGTCGATTTGGGTAT--GAAGCGGATCTATAATACGAAAAACC 61858 || || |||| || || | || | ||| | | | | | | | || |||| | Sbjct 16036617 GTGGCACACCGACTTATGCTGGAGCTAGGTTTTGGCAAGGTTTTCAGAGTA--GAAAATC 16036674 Query 61859 CATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTG 61918 ||||||| |||||||| | ||||| ||||| || | || || || ||||| | | Sbjct 16036675 CATTTGACTTCATGGAGAATATTTCACTGGAAGGGA-----AACTTCTTTGAGAAGAGAG 16036729 Query 61919 TAGGCGACTATCA 61931 |||| || ||||| Sbjct 16036730 TAGGTGAGTATCA 16036742 >seq7870 Length=10551609 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || ||||| || || |||| ||||| || Sbjct 10326684 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 10326625 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| || Sbjct 10326624 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 10326565 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 10326564 AGACTCAATGATGGCATACCAAAG 10326541 >seq7786 Length=83011774 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||| || || | ||||| || |||||||| ||||| || ||| ||| |||||| Sbjct 48125958 CAGGAGGTACAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 48125899 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 48125898 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 48125852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397529857326080