Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq76 235 9e-60
seq51 158 2e-36
seq1236 105 1e-20
>seq76
Length=5751067
Score = 235 bits (260), Expect = 9e-60
Identities = 194/235 (83%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||||| | | |||||||| | | || | | ||||||| |||||||||||||| || |
Sbjct 928485 TACTAAACAGGATTACCATGGCAACAACAGATTATCAGTAAGGTAAAACTAACCTATCCC 928544
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
|||| ||||||| |||||||||| || |||| ||||| |||||||||||| || | |
Sbjct 928545 ATGATGGTCTAATCCCAGCTCACCTTTCCTACTAGTGAATGAACAATCCAATGCCTGGTG 928604
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| ||||||||||||| | ||||| |||||||| |||||||| | | ||
Sbjct 928605 AATTCTGCTTCATAATGATAGGAAGAGACAACATCAAAGGATCATAAAGCAACATTGTTA 928664
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
|||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||
Sbjct 928665 TGAACGCTTGGCCACCACAAGCCAGTTATCCTTGTGGTAACTCTTCTGACACCTC 928719
>seq51
Length=7797896
Score = 158 bits (174), Expect = 2e-36
Identities = 203/273 (74%), Gaps = 18/273 (7%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC----- 86
||||||| ||||||||||| |||| ||||| |||||||||||||||| ||
Sbjct 7651436 CATCAGTTATGTAAAACTAACATGTC-CATGATAGTCTAAACCCAGCTCATGTAAGTGAA 7651494
Query 87 ----CCTATTAGTGG-GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGG 141
|| ||||||| ||||||||||||| | || ||||||||||||| |||||||
Sbjct 7651495 CAATCCAATTAGTGAAGTGAACAATCCAATGTTTGGTGAATTCTGCTTCGCAGTGATAGG 7651554
Query 142 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201
|||||| ||||| ||| ||||||||||| | | ||| |||| ||||| |||||||||
Sbjct 7651555 AAGAGCTGACATTGAATGATCAAAAAGCGA--TTGCTGTGAATACTTGGTTGCCACAAGA 7651612
Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261
|||||| || | ||| || ||||| |||||| | || ||| | | || | |||
Sbjct 7651613 CAGTTAGCCTTTTGGGAAGTTTTCCAACACCTCCTG-CTGAAAACCCAAAGGTCAGAAGT 7651671
Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
||| || | | |||||||||||| ||||| ||
Sbjct 7651672 ATC-AT-GAC--CACTTTCATGGTCTGTATCCA 7651700
>seq1236
Length=398273
Score = 105 bits (116), Expect = 1e-20
Identities = 78/90 (87%), Gaps = 1/90 (1%)
Strand=Plus/Plus
Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196
||||| ||| |||||| ||||||||||||||||| | |||| | || ||||| |||||
Sbjct 387070 ATAGGGAGAATCGACATA-AAGGATCAAAAAGCAACCTTGCTAAGCACTCTTGGATGCCA 387128
Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCT 226
|||||||||||||||||||||||||||||
Sbjct 387129 TAAGCCAGTTATCCCTGTGGTAACTTTTCT 387158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854366738208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |