Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq76 235 9e-60 seq51 158 2e-36 seq1236 105 1e-20 >seq76 Length=5751067 Score = 235 bits (260), Expect = 9e-60 Identities = 194/235 (83%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||| | | |||||||| | | || | | ||||||| |||||||||||||| || | Sbjct 928485 TACTAAACAGGATTACCATGGCAACAACAGATTATCAGTAAGGTAAAACTAACCTATCCC 928544 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 |||| ||||||| |||||||||| || |||| ||||| |||||||||||| || | | Sbjct 928545 ATGATGGTCTAATCCCAGCTCACCTTTCCTACTAGTGAATGAACAATCCAATGCCTGGTG 928604 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| ||||||||||||| | ||||| |||||||| |||||||| | | || Sbjct 928605 AATTCTGCTTCATAATGATAGGAAGAGACAACATCAAAGGATCATAAAGCAACATTGTTA 928664 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||| ||||||||||||||||| |||||||||| ||||| |||||| Sbjct 928665 TGAACGCTTGGCCACCACAAGCCAGTTATCCTTGTGGTAACTCTTCTGACACCTC 928719 >seq51 Length=7797896 Score = 158 bits (174), Expect = 2e-36 Identities = 203/273 (74%), Gaps = 18/273 (7%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC----- 86 ||||||| ||||||||||| |||| ||||| |||||||||||||||| || Sbjct 7651436 CATCAGTTATGTAAAACTAACATGTC-CATGATAGTCTAAACCCAGCTCATGTAAGTGAA 7651494 Query 87 ----CCTATTAGTGG-GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGG 141 || ||||||| ||||||||||||| | || ||||||||||||| ||||||| Sbjct 7651495 CAATCCAATTAGTGAAGTGAACAATCCAATGTTTGGTGAATTCTGCTTCGCAGTGATAGG 7651554 Query 142 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201 |||||| ||||| ||| ||||||||||| | | ||| |||| ||||| ||||||||| Sbjct 7651555 AAGAGCTGACATTGAATGATCAAAAAGCGA--TTGCTGTGAATACTTGGTTGCCACAAGA 7651612 Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261 |||||| || | ||| || ||||| |||||| | || ||| | | || | ||| Sbjct 7651613 CAGTTAGCCTTTTGGGAAGTTTTCCAACACCTCCTG-CTGAAAACCCAAAGGTCAGAAGT 7651671 Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||| || | | |||||||||||| ||||| || Sbjct 7651672 ATC-AT-GAC--CACTTTCATGGTCTGTATCCA 7651700 >seq1236 Length=398273 Score = 105 bits (116), Expect = 1e-20 Identities = 78/90 (87%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 ||||| ||| |||||| ||||||||||||||||| | |||| | || ||||| ||||| Sbjct 387070 ATAGGGAGAATCGACATA-AAGGATCAAAAAGCAACCTTGCTAAGCACTCTTGGATGCCA 387128 Query 197 CAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 ||||||||||||||||||||||||||||| Sbjct 387129 TAAGCCAGTTATCCCTGTGGTAACTTTTCT 387158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854366738208