Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq77 82.4 1e-13 seq71 82.4 1e-13 seq259 78.8 2e-12 seq461 77.0 5e-12 >seq77 Length=6454764 Score = 82.4 bits (90), Expect = 1e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| || || || |||||||||||||||| |||||||| |||||||||||||| Sbjct 2858767 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAA 2858708 Query 105 GTCAGAATCC 114 |||||||||| Sbjct 2858707 GTCAGAATCC 2858698 >seq71 Length=4369457 Score = 82.4 bits (90), Expect = 1e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| || || || |||||||||||||||| |||||||| |||||||||||||| Sbjct 2172670 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAA 2172611 Query 105 GTCAGAATCC 114 |||||||||| Sbjct 2172610 GTCAGAATCC 2172601 >seq259 Length=3797764 Score = 78.8 bits (86), Expect = 2e-12 Identities = 63/75 (84%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| || || || |||||||||||||||| |||||||| ||||| |||||||| Sbjct 48418 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAA 48477 Query 105 GTCAGAATCCATGCC 119 |||||||||| |||| Sbjct 48478 GTCAGAATCC-TGCC 48491 >seq461 Length=2776685 Score = 77.0 bits (84), Expect = 5e-12 Identities = 76/96 (79%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 24 AGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGG 83 ||||| ||||| | || | || |||| || || || ||||||||||||||| || Sbjct 2390554 AGAAT--TTGGTGTATGTGCTTGACTGAGGAGCCAATGGGGCGAAGCTACCATCTTTGGG 2390611 Query 84 ATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 |||||| |||||| ||||||||||||||||| |||| Sbjct 2390612 ATTATGACTGAACACCTCTAAGTCAGAATCC-TGCC 2390646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819169105152