Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq77 82.4 1e-13
seq71 82.4 1e-13
seq259 78.8 2e-12
seq461 77.0 5e-12
>seq77
Length=6454764
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || |||||||||||||||| |||||||| ||||||||||||||
Sbjct 2858767 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAA 2858708
Query 105 GTCAGAATCC 114
||||||||||
Sbjct 2858707 GTCAGAATCC 2858698
>seq71
Length=4369457
Score = 82.4 bits (90), Expect = 1e-13
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || |||||||||||||||| |||||||| ||||||||||||||
Sbjct 2172670 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAA 2172611
Query 105 GTCAGAATCC 114
||||||||||
Sbjct 2172610 GTCAGAATCC 2172601
>seq259
Length=3797764
Score = 78.8 bits (86), Expect = 2e-12
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || |||||||||||||||| |||||||| ||||| ||||||||
Sbjct 48418 TGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAA 48477
Query 105 GTCAGAATCCATGCC 119
|||||||||| ||||
Sbjct 48478 GTCAGAATCC-TGCC 48491
>seq461
Length=2776685
Score = 77.0 bits (84), Expect = 5e-12
Identities = 76/96 (79%), Gaps = 3/96 (3%)
Strand=Plus/Plus
Query 24 AGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGG 83
||||| ||||| | || | || |||| || || || ||||||||||||||| ||
Sbjct 2390554 AGAAT--TTGGTGTATGTGCTTGACTGAGGAGCCAATGGGGCGAAGCTACCATCTTTGGG 2390611
Query 84 ATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
|||||| |||||| ||||||||||||||||| ||||
Sbjct 2390612 ATTATGACTGAACACCTCTAAGTCAGAATCC-TGCC 2390646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819169105152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |