Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq688 172 2e-40 seq1236 132 1e-28 seq517 84.2 7e-14 seq518 78.8 3e-12 seq94 77.0 1e-11 >seq688 Length=1121251 Score = 172 bits (190), Expect = 2e-40 Identities = 119/135 (88%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 49 TTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT 108 |||||| ||| | || | ||| ||| || ||||| || | |||||||||||||||||||| Sbjct 23639 TTGTCATTACTTTCCTGGGTCAGGAGTGAGTAATCTGTGAGCCTGCTGCCTTCCTTGGAT 23698 Query 109 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168 |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 23699 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTG 23758 Query 169 GATACCATGGTAGGC 183 | |||||||||||| Sbjct 23759 GTCACCATGGTAGGC 23773 >seq1236 Length=398273 Score = 132 bits (146), Expect = 1e-28 Identities = 124/155 (80%), Gaps = 6/155 (4%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || || |||| ||||||| ||||||| || ||| |||| Sbjct 383840 CTCATTCCAATTACAGGGCCTCAGAAGACTCCTGTAT---TATTTATCATCGCTATCTCC 383784 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | || ||||| |||||||||| || |||||||||| | ||||||||||| || |||| Sbjct 383783 CGGT--CGGGAGGGGGTAATTTGTGCACCTGCTGCCTGCTTTGGATGTGGTCGCTGTTTT 383726 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCC 157 |||| ||||||||| |||||| ||||| ||| || Sbjct 383725 TCAGCCTCCCTCTCTGGAATCAAACCCGGATTGCC 383691 >seq517 Length=915109 Score = 84.2 bits (92), Expect = 7e-14 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 76 GGGTAATTTGCGCGCCTGCT-GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTC 134 ||| ||||||| | |||||| |||||||||||| | |||||| |||| |||| || |||| Sbjct 800697 GGGCAATTTGCACACCTGCTTGCCTTCCTTGGACGGGGTAGCTGTTTGTCAGACTTCCTC 800756 Query 135 TCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||| ||| || | || ||||||| | ||| | || | ||| |||||| Sbjct 800757 TCCTGAAAGGAGCTCTGATTCCCCATCACCTG-TGGTCCCAAGGTAGG 800803 >seq518 Length=1060035 Score = 78.8 bits (86), Expect = 3e-12 Identities = 66/80 (83%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 81 ATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGA 140 ||| | || |||||||| ||||||||||||||| || |||||||||||||| ||||| | Sbjct 458908 ATTGGAGCCCCTGCTGCGTTCCTTGGATGTGGTGGC-GTTTCTCAGGCTCCGCCTCCGCA 458850 Query 141 ATCGAACCCTAATTCCCCGT 160 |||| | || |||||||| Sbjct 458849 ATCGGATCCGGGTTCCCCGT 458830 >seq94 Length=4555704 Score = 77.0 bits (84), Expect = 1e-11 Identities = 69/87 (79%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 ||| |||| ||||| | |||||||||| ||| | ||||||| | ||||||||||||| Sbjct 3677806 GGAATGGGGAATTTACATGCCTGCTGCCATCCCTAGATGTGGCGTCTGTTTCTCAGGCTC 3677747 Query 131 CCTCTCCGGAATCGAACCCTAATTCCC 157 ||||||| ||| | | ||| |||||| Sbjct 3677746 CCTCTCCAGAACCATAACCTGATTCCC 3677720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510341200128