Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 235 4e-57
seq417 132 4e-26
seq3 111 1e-19
seq158 95.1 1e-14
>seq1020
Length=850931
Score = 235 bits (260), Expect = 4e-57
Identities = 599/899 (67%), Gaps = 22/899 (2%)
Strand=Plus/Plus
Query 61041 AGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTA 61100
||| || ||||||| || || | |||||||||||||| |||||||||| | |||
Sbjct 338160 AGAAAACCCTCGTCACTTTGTCATCTTCCCCATCGAGTACTGTGATATTTGGCAGAGGTA 338219
Query 61101 CAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAA 61160
|| || || || |||||||| ||||| | || |||| ||| | ||||| ||||| |
Sbjct 338220 TAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAAAGGTGGATCTTTCCAAGGACATTCA 338279
Query 61161 TGACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTC 61218
||||||| | | | | | || || || || || || || |||| |||
Sbjct 338280 GCACTGGGAATCCCTGAAGCCTGAGGAGAGATACTTTATATCCCAC--GTTCTGGCTTTC 338337
Query 61219 TTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGT 61277
||||| || || || ||||| ||||| || || |||| || ||| || || || ||
Sbjct 338338 TTTGCAGCGAGTGATGGCATCGTAAATGAAAACTTGGTGGAGCGGTTTAGC-CAAGAAGT 338396
Query 61278 GCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTC 61337
|| | | || || || |||||||| | |||||| |||||||||| || |||| ||
Sbjct 338397 TCAGATTACAGAAGCCCGCTGTTTCTATGACTTCCAATTTGCCATGGAAAACATCCATTC 338456
Query 61338 GGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATT 61397
|||||||||||| | |||| || || || || | || ||| | ||| |
Sbjct 338457 TGAGATGTACAGTCTCCTCACTGACACTTATATTAAAGATTCCAAAGAAAGGGAATTTCT 338516
Query 61398 GTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTG 61457
||||| ||||||||||| || || || ||| ||| || ||||||||||| ||||
Sbjct 338517 CTTCAACGCCATCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTG 338576
Query 61458 GATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515
|| | |||| || ||| | || ||||| | |||| ||||| | || ||
Sbjct 338577 GA--CTGGGGACAAAGAGGGTACCTACGGGGAACGGGTTGTGGCTTTTGCTGCTGTGGAA 338634
Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575
|| | | || ||| || ||||| | || || ||| | ||||||||||| || |||
Sbjct 338635 GGAATCCTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAACGTGGCCTGATG 338694
Query 61576 CCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGGGCATGCATTGTGATTT 61634
|| || || |||| ||||| | || || || | || ||||| | || ||||| ||
Sbjct 338695 CCTGGCCTCGCCTTTTCCAATGAACTTACTAGCA-GAGATGAGGGTTTACACTGTGACTT 338753
Query 61635 TGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGA 61694
||| || | ||||||| | ||||| | || || ||| || | ||| ||
Sbjct 338754 TGCCTGCCTGATGTTCAAAC---ACCTGGTCCACAAACCTTCCGAGCAGAGAGTGAAGGA 338810
Query 61695 GATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTC 61754
|| || | | || || || || ||||| || || || || || ||||| ||
Sbjct 338811 AATAATTATTAATGCCGTTCGGATAGAGCAGGAGTTCCTCACGGAGGCCTTGCCTGTGAA 338870
Query 61755 ACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCT 61814
||||| || |||||||| | ||||| |||||||||||| || || || ||||| ||
Sbjct 338871 GCTCATTGGGATGAATTGCACATTAATGAAGCAGTATATTGAGTTCGTGGCAGACCGACT 338930
Query 61815 GTTGGTCGATTTGGGTAT--GAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATG 61872
|| | || | ||| | | | | | | | || |||| |||||||| || |||
Sbjct 338931 TATGCTGGAGCTAGGTTTTGGCAAGGTTTTCAGAGTA--GAAAATCCATTTGACTTTATG 338988
Query 61873 GACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
|| | ||||| ||||| || ||||| || ||| ||||| | |||||||| |||||
Sbjct 338989 GAGAATATTTCACTGGAAGGGAAGACTAACTTT---GAGAAGAGAGTAGGCGAATATCA 339044
>seq417
Length=2207251
Score = 132 bits (146), Expect = 4e-26
Identities = 423/648 (65%), Gaps = 11/648 (2%)
Strand=Plus/Minus
Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347
|| || || |||||||| |||||||| ||| ||||||| || | || || ||||||||
Sbjct 864320 GAAGCCCGCTGTTTCTATGGCTTCCAAATTACCATGGAAAACATTCATTCTGAGATGTAT 864261
Query 61348 AGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCC 61407
||| | ||||| || || ||||| | || | ||| | ||| | ||||| |||
Sbjct 864260 AGTCTCCTCATTGACACTTACATTAAAGATTCCGAAGAAAGGGAATTTCTCTTCAACGCC 864201
Query 61408 ATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGT 61467
|| ||||| || || || ||| | | || | |||||||| ||||||| |
Sbjct 864200 ATGGAGACAATGCCTTGTGTAAAGAAGGAGGCAGCCTGGGCCTTGCGTTGGATCGG--GG 864143
Query 61468 ACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTT 61525
|||| | ||||| | || ||||| | ||| ||||| | || || || | || |
Sbjct 864142 ACAAAGAGGCTACCTACGGGGAACGGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTTCT 864083
Query 61526 TCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGA 61585
| ||| || |||| | || || ||| | |||||||| | || ||||| || || |
Sbjct 864082 TTTCTGGTTCTTTTGAGTCGATATTCTGGCTCAAGAAACGCAGCCTGATGCCTGGCCTCA 864023
Query 61586 CCTTCAGCAATGAGTTGAT-ATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644
| || |||||| | || | || | || ||||| | || ||||| ||||| ||
Sbjct 864022 CGTTTTCCAATGAACTTATTAGCA-GAGATGAGGGTTTACACTGTGACTTTGCCTGCCTG 863964
Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT 61704
| ||||||| | ||||| | || || ||| || | ||| || || || |
Sbjct 863963 ATGTTCAAACAC---CTGGTCCACAAACCTTCCGAGCAGGGAGTGAAGGAAATAATTATT 863907
Query 61705 GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGC 61764
| || || || || |||| ||| | | || || |||||| | |||| ||
Sbjct 863906 AATGCCGTTCAGATAGAGCAGGGATTCATCAAGGAGGCCTTGCCCATGAAGTTCATTGGG 863847
Query 61765 ATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA- 61823
|||||||| ||||| |||||||||||| || || || ||||| || || | ||
Sbjct 863846 ATGAATTGCATGTTAATGAAGCAGTATATTGAGTTCGTGGCAGACCGACTTATGCTGGAG 863787
Query 61824 TTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTC 61883
| || | || || | | | | |||| |||||||| | ||||| | |||||
Sbjct 863786 CTAGGTTTTGGCAAGGTTTTCGGAGTAG-AAAATCCATTTGACTATATGGAGAATATTTC 863728
Query 61884 GCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
||||| || ||||| || || || | ||| | |||||||| |||||
Sbjct 863727 ACTGGAAGGGAAGACTAACTTCTTTGTGAAGAGAGTAGGCGAGTATCA 863680
>seq3
Length=9835568
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| |||||||| || ||||| || || |||| ||||| ||
Sbjct 160801 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 160860
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| ||
Sbjct 160861 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 160920
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 160921 AGACTCAATGATGGCATACCAAAG 160944
>seq158
Length=7371824
Score = 95.1 bits (104), Expect = 1e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
|||||||| || || ||||||| || |||||||| ||||| || || ||| ||||||
Sbjct 3459478 CAGGAGGTACAGGTTCCGGAGGCTCGCTGTTTCTATGGCTTTCAAATCCTCATCGAGAAT 3459537
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || || |||||||| ||
Sbjct 3459538 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 3459584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397549137013520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |