Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1020 235 4e-57 seq417 132 4e-26 seq3 111 1e-19 seq158 95.1 1e-14 >seq1020 Length=850931 Score = 235 bits (260), Expect = 4e-57 Identities = 599/899 (67%), Gaps = 22/899 (2%) Strand=Plus/Plus Query 61041 AGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTA 61100 ||| || ||||||| || || | |||||||||||||| |||||||||| | ||| Sbjct 338160 AGAAAACCCTCGTCACTTTGTCATCTTCCCCATCGAGTACTGTGATATTTGGCAGAGGTA 338219 Query 61101 CAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAA 61160 || || || || |||||||| ||||| | || |||| ||| | ||||| ||||| | Sbjct 338220 TAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAAAAGGTGGATCTTTCCAAGGACATTCA 338279 Query 61161 TGACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTC 61218 ||||||| | | | | | || || || || || || || |||| ||| Sbjct 338280 GCACTGGGAATCCCTGAAGCCTGAGGAGAGATACTTTATATCCCAC--GTTCTGGCTTTC 338337 Query 61219 TTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGT 61277 ||||| || || || ||||| ||||| || || |||| || ||| || || || || Sbjct 338338 TTTGCAGCGAGTGATGGCATCGTAAATGAAAACTTGGTGGAGCGGTTTAGC-CAAGAAGT 338396 Query 61278 GCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTC 61337 || | | || || || |||||||| | |||||| |||||||||| || |||| || Sbjct 338397 TCAGATTACAGAAGCCCGCTGTTTCTATGACTTCCAATTTGCCATGGAAAACATCCATTC 338456 Query 61338 GGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATT 61397 |||||||||||| | |||| || || || || | || ||| | ||| | Sbjct 338457 TGAGATGTACAGTCTCCTCACTGACACTTATATTAAAGATTCCAAAGAAAGGGAATTTCT 338516 Query 61398 GTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTG 61457 ||||| ||||||||||| || || || ||| ||| || ||||||||||| |||| Sbjct 338517 CTTCAACGCCATCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTG 338576 Query 61458 GATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 || | |||| || ||| | || ||||| | |||| ||||| | || || Sbjct 338577 GA--CTGGGGACAAAGAGGGTACCTACGGGGAACGGGTTGTGGCTTTTGCTGCTGTGGAA 338634 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | | || ||| || ||||| | || || ||| | ||||||||||| || ||| Sbjct 338635 GGAATCCTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAACGTGGCCTGATG 338694 Query 61576 CCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGGGCATGCATTGTGATTT 61634 || || || |||| ||||| | || || || | || ||||| | || ||||| || Sbjct 338695 CCTGGCCTCGCCTTTTCCAATGAACTTACTAGCA-GAGATGAGGGTTTACACTGTGACTT 338753 Query 61635 TGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGA 61694 ||| || | ||||||| | ||||| | || || ||| || | ||| || Sbjct 338754 TGCCTGCCTGATGTTCAAAC---ACCTGGTCCACAAACCTTCCGAGCAGAGAGTGAAGGA 338810 Query 61695 GATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTC 61754 || || | | || || || || ||||| || || || || || ||||| || Sbjct 338811 AATAATTATTAATGCCGTTCGGATAGAGCAGGAGTTCCTCACGGAGGCCTTGCCTGTGAA 338870 Query 61755 ACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCT 61814 ||||| || |||||||| | ||||| |||||||||||| || || || ||||| || Sbjct 338871 GCTCATTGGGATGAATTGCACATTAATGAAGCAGTATATTGAGTTCGTGGCAGACCGACT 338930 Query 61815 GTTGGTCGATTTGGGTAT--GAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATG 61872 || | || | ||| | | | | | | | || |||| |||||||| || ||| Sbjct 338931 TATGCTGGAGCTAGGTTTTGGCAAGGTTTTCAGAGTA--GAAAATCCATTTGACTTTATG 338988 Query 61873 GACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || | ||||| ||||| || ||||| || ||| ||||| | |||||||| ||||| Sbjct 338989 GAGAATATTTCACTGGAAGGGAAGACTAACTTT---GAGAAGAGAGTAGGCGAATATCA 339044 >seq417 Length=2207251 Score = 132 bits (146), Expect = 4e-26 Identities = 423/648 (65%), Gaps = 11/648 (2%) Strand=Plus/Minus Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347 || || || |||||||| |||||||| ||| ||||||| || | || || |||||||| Sbjct 864320 GAAGCCCGCTGTTTCTATGGCTTCCAAATTACCATGGAAAACATTCATTCTGAGATGTAT 864261 Query 61348 AGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCC 61407 ||| | ||||| || || ||||| | || | ||| | ||| | ||||| ||| Sbjct 864260 AGTCTCCTCATTGACACTTACATTAAAGATTCCGAAGAAAGGGAATTTCTCTTCAACGCC 864201 Query 61408 ATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGT 61467 || ||||| || || || ||| | | || | |||||||| ||||||| | Sbjct 864200 ATGGAGACAATGCCTTGTGTAAAGAAGGAGGCAGCCTGGGCCTTGCGTTGGATCGG--GG 864143 Query 61468 ACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTT 61525 |||| | ||||| | || ||||| | ||| ||||| | || || || | || | Sbjct 864142 ACAAAGAGGCTACCTACGGGGAACGGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTTCT 864083 Query 61526 TCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGA 61585 | ||| || |||| | || || ||| | |||||||| | || ||||| || || | Sbjct 864082 TTTCTGGTTCTTTTGAGTCGATATTCTGGCTCAAGAAACGCAGCCTGATGCCTGGCCTCA 864023 Query 61586 CCTTCAGCAATGAGTTGAT-ATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644 | || |||||| | || | || | || ||||| | || ||||| ||||| || Sbjct 864022 CGTTTTCCAATGAACTTATTAGCA-GAGATGAGGGTTTACACTGTGACTTTGCCTGCCTG 863964 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT 61704 | ||||||| | ||||| | || || ||| || | ||| || || || | Sbjct 863963 ATGTTCAAACAC---CTGGTCCACAAACCTTCCGAGCAGGGAGTGAAGGAAATAATTATT 863907 Query 61705 GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGC 61764 | || || || || |||| ||| | | || || |||||| | |||| || Sbjct 863906 AATGCCGTTCAGATAGAGCAGGGATTCATCAAGGAGGCCTTGCCCATGAAGTTCATTGGG 863847 Query 61765 ATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGA- 61823 |||||||| ||||| |||||||||||| || || || ||||| || || | || Sbjct 863846 ATGAATTGCATGTTAATGAAGCAGTATATTGAGTTCGTGGCAGACCGACTTATGCTGGAG 863787 Query 61824 TTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTC 61883 | || | || || | | | | |||| |||||||| | ||||| | ||||| Sbjct 863786 CTAGGTTTTGGCAAGGTTTTCGGAGTAG-AAAATCCATTTGACTATATGGAGAATATTTC 863728 Query 61884 GCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 ||||| || ||||| || || || | ||| | |||||||| ||||| Sbjct 863727 ACTGGAAGGGAAGACTAACTTCTTTGTGAAGAGAGTAGGCGAGTATCA 863680 >seq3 Length=9835568 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || ||||| || || |||| ||||| || Sbjct 160801 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 160860 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| || Sbjct 160861 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 160920 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 160921 AGACTCAATGATGGCATACCAAAG 160944 >seq158 Length=7371824 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||| || || ||||||| || |||||||| ||||| || || ||| |||||| Sbjct 3459478 CAGGAGGTACAGGTTCCGGAGGCTCGCTGTTTCTATGGCTTTCAAATCCTCATCGAGAAT 3459537 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 3459538 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 3459584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397549137013520