Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq2002 141 1e-31
>seq2002
Length=2058770
Score = 141 bits (156), Expect = 1e-31
Identities = 175/234 (75%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||||| ||||| | || || |||||| ||| || |
Sbjct 252529 GTACAAAGGGCAGGGACTTAATCAACGTAAGCTT-ACAACCTGCACTTACTGGGAGTT-C 252586
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||| ||||||| ||||| | ||
Sbjct 252587 CTCGTTCATGTGGAATAATTGCAATCCCCAATCCCTATCACGAATGGGGTTCAACGGGTT 252646
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 252647 ACCCACGCCTGCCGGCATAGGGTAGGCACACGATGAGCCAGTCAGTGTAGCGCGCGTGCA 252706
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 252707 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 252759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751875965590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |