Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08]
837,179 sequences; 2,878,133,036 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq17872 168 1e-39
seq59684 77.0 6e-12
seq616597 73.4 7e-11
seq303782 73.4 7e-11
>seq17872
Length=21729
Score = 168 bits (186), Expect = 1e-39
Identities = 207/278 (74%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACT-TTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | || ||||||||||||||||||||||||
Sbjct 13937 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCTGAACCGTTTACTTTGAAAAAATTAGAGTGT 13878
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 13877 TCAAAGCAGGCCCGAGCCGCCTGGATACCACAGCTAGGAATAATGGAATAGGACC-GCGG 13819
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
|||| |||||||||||| | || | | |||||||| |||||| | |||||| |
Sbjct 13818 TTCTCTTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGATGGCCGGGGGCATTC 13759
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 13758 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 13699
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| |||| |||||
Sbjct 13698 TTTGCCAAGAATGTTTTCATTAATCA-AGAACAAAAGT 13662
>seq59684
Length=3972
Score = 77.0 bits (84), Expect = 6e-12
Identities = 61/72 (85%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 262 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 321
Query 98 TCAAAGCAGGCC 109
||||||||||||
Sbjct 322 TCAAAGCAGGCC 333
Score = 73.4 bits (80), Expect = 7e-11
Identities = 93/127 (73%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||| |||||| | | |||| | ||||| | ||||||||||||||||||
Sbjct 365 ATGATTAAGAGGGATGGCCAGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 424
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
| ||||| || | | ||||| || ||||| |||||||||||||||| |||
Sbjct 425 CCGGTGCAAGACGGACCAGAGTGAAAGAATTTGCCAAGAATGTTTTCATTAATCA-AGAA 483
Query 306 CGAAAGT 312
|||||||
Sbjct 484 CGAAAGT 490
>seq616597
Length=332
Score = 73.4 bits (80), Expect = 7e-11
Identities = 93/127 (73%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||| ||||| | |||||| | ||||| | ||||||||||||||||||
Sbjct 1 ATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 60
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
||||| || | | |||||| || ||||| |||||||||||||||| |||
Sbjct 61 CCGGCGCAAGACGGACCAGAGTGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 119
Query 306 CGAAAGT 312
|||||||
Sbjct 120 CGAAAGT 126
>seq303782
Length=235
Score = 73.4 bits (80), Expect = 7e-11
Identities = 60/72 (83%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| || || ||| | | | ||||||||||||||||||||||||
Sbjct 133 ATGCTCTTAGCTGAGTGTCCCACGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 192
Query 98 TCAAAGCAGGCC 109
||||||||||||
Sbjct 193 TCAAAGCAGGCC 204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 907538137792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |