Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08]
837,179 sequences; 2,878,133,036 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq158694 150 7e-34
seq74166 149 3e-33
seq33763 149 3e-33
seq17872 145 3e-32
seq49320 140 1e-30
seq728659 132 2e-28
seq11240 111 6e-22
seq3088 111 6e-22
seq32712 102 3e-19
seq9252 82.4 3e-13
seq2462 78.8 4e-12
seq11451 75.2 5e-11
seq1196 75.2 5e-11
>seq158694
Length=208
Score = 150 bits (166), Expect = 7e-34
Identities = 113/133 (85%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | ||||| | |||| |||||||||||||||||||||||||||| |||||||||
Sbjct 72 GAGCATGAGCACACGTGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGTGAAG 131
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
|||||||||||||||||||||| || |||||| ||| ||||||||||| ||||| |
Sbjct 132 CCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCTGACC 191
Query 669 TGGGTATAGGGGC 681
|| ||||||||||
Sbjct 192 TGCGTATAGGGGC 204
>seq74166
Length=18784
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 17216 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 17275
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 17276 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 17335
>seq33763
Length=5759
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 4382 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 4323
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 4322 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 4263
Score = 120 bits (132), Expect = 1e-24
Identities = 123/160 (77%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 5492 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 5433
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 5432 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTG--A 5375
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 5374 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 5335
>seq17872
Length=21729
Score = 145 bits (160), Expect = 3e-32
Identities = 104/120 (87%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||| |||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 8539 TGTTAGGACCTGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 8480
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 8479 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 8420
Score = 116 bits (128), Expect = 2e-23
Identities = 120/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 9602 GAGTTGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 9543
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 9542 ACCGGCACGAGACCGATAGTCAACAAGTACTGTAAGGGAAAGTTGAAAAGAACTTTGAAG 9483
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
|||||||| || || ||||||| ||| | ||| ||
Sbjct 9482 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAA 9446
>seq49320
Length=25279
Score = 140 bits (154), Expect = 1e-30
Identities = 103/120 (86%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 13250 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 13191
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | ||| || ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 13190 GTGGAGGTCTGTAGCTGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 13131
>seq728659
Length=461
Score = 132 bits (146), Expect = 2e-28
Identities = 100/118 (85%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| | |||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 166 TGTTAGAACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 107
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
||||||| || |||||| ||| | ||||||||| ||||| | || ||||||||||
Sbjct 106 GTGGAGGTCCGTAGCGGTCCTGACTTGCAAATCGGTCGTCTGACCTGCGTATAGGGGC 49
>seq11240
Length=217766
Score = 111 bits (122), Expect = 6e-22
Identities = 98/121 (81%), Gaps = 1/121 (1%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||| || |||||||||||||||||| || ||| |||||||||||||||||
Sbjct 6021 TGTTAGGACCCAAATGATGGTGAACTATGCCTGGATGGGGCGAAGCCAGAGGAAACTCCA 6080
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA-GGGGCG 682
||||||| | |||||| ||| ||||||||| || || | |||||||| ||||||
Sbjct 6081 GTGGAGGTCCATAGCGGTCCTGATGTGCAAATCAGTCATCTGACCTGGGTATATGGGGCG 6140
Query 683 A 683
|
Sbjct 6141 A 6141
>seq3088
Length=622919
Score = 111 bits (122), Expect = 6e-22
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| | |||| |||| ||||||||||| |||| ||||| |||| ||||||||||
Sbjct 507831 GAGCACACGTGTTAGGACTGGAAAGATGGTGGACTAGGCCTGGGCAGGGCGAAGCCAGAG 507890
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||||||||||||| || ||||| ||| | |||||||| | ||| || | ||||
Sbjct 507891 CAAACTCTGGTGGAGGTCCGTGGCGGTCCTGACATGCAAATCAGTTGTCCAACCTAGGTA 507950
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 507951 TAGGGGCGA 507959
>seq32712
Length=149392
Score = 102 bits (112), Expect = 3e-19
Identities = 80/96 (83%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
||||||||| |||| |||||||||||||||||||||||||| || ||| || ||| |
Sbjct 12162 CTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCAGTCCTGAC 12103
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||| ||||| | |||||||| ||||||
Sbjct 12102 GTGCAAATCGGTCGTCTGACCTGGGTATAAGGGCGA 12067
Score = 78.8 bits (86), Expect = 4e-12
Identities = 61/73 (84%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670
|||||||||||||||||||| || ||| || ||| ||||||||||| ||||| | ||
Sbjct 11948 AGAGGAAACTCTGGTGGAGGTCCGTAGCAGTCCTGACGTGCAAATCGGTCGTCTGACCTG 11889
Query 671 GGTATAGGGGCGA 683
|||||| ||||||
Sbjct 11888 GGTATAAGGGCGA 11876
>seq9252
Length=177268
Score = 82.4 bits (90), Expect = 3e-13
Identities = 85/110 (77%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| |||| ||||||||||||| | ||| || |||||| | | ||||| |||||||
Sbjct 151799 GAGTCCGGTTGCTTGGGAATGCAGCCCAAAACTGGTGGTAAACTCCATCTAAGGCTAAAT 151740
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149
| |||| ||||||| |||| ||||||| | | ||||| |||||||
Sbjct 151739 ACTGGCAAGAGACCAATAGTCAACAAGTACCAT-AGGGAAAGTTGAAAAG 151691
Score = 82.4 bits (90), Expect = 3e-13
Identities = 85/110 (77%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| |||| ||||||||||||| | ||| || |||||| | | ||||| |||||||
Sbjct 153299 GAGTCCGGTTGCTTGGGAATGCAGCCCAAAACTGGTGGTAAACTCCATCTAAGGCTAAAT 153240
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149
| |||| ||||||| |||| ||||||| | | ||||| |||||||
Sbjct 153239 ACTGGCAAGAGACCAATAGTCAACAAGTACCAT-AGGGAAAGTTGAAAAG 153191
>seq2462
Length=201339
Score = 78.8 bits (86), Expect = 4e-12
Identities = 89/119 (75%), Gaps = 3/119 (3%)
Strand=Plus/Plus
Query 566 TTGGGACCCGAAAGATGGTGAACTATG---CCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
|| ||||| ||||||||||||||||| |||| |||| |||||||||||||||||
Sbjct 140285 TTAGGACCTGAAAGATGGTGAACTATTATTCCTGGGCAGGGCAAAGCCAGAGGAAACTCT 140344
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
| || ||| |||| || ||| | || ||||| | |||| | ||| ||| |||||
Sbjct 140345 GCTGAAGGTCTTCAGCAGTCCTGACATGTAAATCAGTTGTCAGACCTGGCTATGGGGGC 140403
>seq11451
Length=646102
Score = 75.2 bits (82), Expect = 5e-11
Identities = 62/76 (82%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
||| | |||| |||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct 153937 GACTCAAAAGTTGGTGAACTATGCCTGGGCAGGAAGAAGCCAGAGGAAACTCTGATGGAG 153996
Query 630 GCTCGCAGCGGTTCTG 645
| || ||| || |||
Sbjct 153997 GTTCATAGCAGTCCTG 154012
>seq1196
Length=80530
Score = 75.2 bits (82), Expect = 5e-11
Identities = 55/64 (86%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
||||||| |||| |||||||||||| | || |||| |||||||||||||| |||||||
Sbjct 47171 TGGGACCTGAAATATGGTGAACTATCCTTGGGCAGGGAGAAGCCAGAGGAAATTCTGGTG 47112
Query 627 GAGG 630
||||
Sbjct 47111 GAGG 47108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2062042510450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |