Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08]
837,179 sequences; 2,878,133,036 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq33763 100 5e-19
seq465192 95.1 2e-17
seq277741 95.1 2e-17
seq17872 93.3 7e-17
seq104154 91.5 2e-16
seq638821 86.0 1e-14
seq18328 86.0 1e-14
seq22774 80.6 4e-13
seq521534 78.8 2e-12
seq233834 78.8 2e-12
seq1989 73.4 6e-11
>seq33763
Length=5759
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 1116 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 1059
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct 1058 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAATTCAGAATCC 1005
>seq465192
Length=271
Score = 95.1 bits (104), Expect = 2e-17
Identities = 91/114 (80%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | |||||| | ||||| | || | || |||| || ||
Sbjct 69 GTACGAGAGGAACTGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAA 126
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 127 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 180
>seq277741
Length=230
Score = 95.1 bits (104), Expect = 2e-17
Identities = 91/114 (80%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|| ||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 151 GTCCGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 94
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||| ||||||| |||||||| ||||||||||||||||||||||||
Sbjct 93 GGGGCGAAGCTCCCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 40
>seq17872
Length=21729
Score = 93.3 bits (102), Expect = 7e-17
Identities = 90/113 (80%), Gaps = 2/113 (2%)
Strand=Plus/Minus
Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61
||||||||||||||| | |||||| | ||||| | || | || |||| || || ||
Sbjct 5569 TACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATG 5512
Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 5511 TTCTGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 5459
>seq104154
Length=1244
Score = 91.5 bits (100), Expect = 2e-16
Identities = 89/112 (79%), Gaps = 2/112 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||| | | |||||| | ||||| | || | || |||| || || |
Sbjct 753 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 696
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112
| |||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct 695 GTGGCGAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAAT 644
>seq638821
Length=348
Score = 86.0 bits (94), Expect = 1e-14
Identities = 73/89 (82%), Gaps = 1/89 (1%)
Strand=Plus/Minus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || ||||||||||||||||| ||||||||
Sbjct 282 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGCGGGATTATGA 223
Query 91 CTGAACGCCTCTAAGTCAGAATCCATGCC 119
||||| |||||||||||||||||| ||||
Sbjct 222 CTGAAGGCCTCTAAGTCAGAATCC-TGCC 195
>seq18328
Length=97728
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| ||||||||||| | ||||| | ||||| | || | || |||| || || |
Sbjct 7835 GTACAAGAGGAACCGCAGG-TTCAGGC-ATTTGGTGTATGTGCTTGGCTGAGAAGCCAAT 7778
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| || || ||||||||||||||||||
Sbjct 7777 GGGGCGAAGCTACCATCTGTGGGATTATGACTAAATGCCTCTAAGTCAGAATCC 7724
>seq22774
Length=187556
Score = 80.6 bits (88), Expect = 4e-13
Identities = 75/94 (80%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| | || | || |||| || | || ||||||||||||||||
Sbjct 68424 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCTAATGGGGCGAAGCTACCATCTGT 68482
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||| ||||||||||||||||||||||||
Sbjct 68483 GGGATTATGACTGAACGCCTCTAAGTCAGAATCC 68516
>seq521534
Length=287
Score = 78.8 bits (86), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 282 GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 232
>seq233834
Length=221
Score = 78.8 bits (86), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 209 GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 159
>seq1989
Length=59621
Score = 73.4 bits (80), Expect = 6e-11
Identities = 60/72 (83%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 48 CTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC 107
|||| || || || || ||||||||||||| |||||||| |||||| ||||||||||
Sbjct 1670 CTGAGGAGCCAATGGAGCAAAGCTACCATCTGTGGGATTATGACTGAACACCTCTAAGTC 1611
Query 108 AGAATCCATGCC 119
||||||| ||||
Sbjct 1610 AGAATCC-TGCC 1600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 812556147456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |