Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq166 113 7e-23 seq87 113 7e-23 >seq166 Length=5848183 Score = 113 bits (124), Expect = 7e-23 Identities = 158/216 (73%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64 ||||||||||||| || ||| ||| | ||| ||||| || || ||| |||||| ||| | Sbjct 1219498 AAAGGGCAGGGACTTAATCACCGCAAACTT-ATGACCTGCACTCACTGGGAATT-CCTTG 1219441 Query 65 TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATTACCC 123 || | | | ||||||||| | |||||||||||| || || || | ||||| Sbjct 1219440 TTCATGGGCGGTAATTGCAATCCCCGGTCCCCATCACGAATGGGGTTCCATGGGTTACCG 1219381 Query 124 GGACCTGTCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGC 181 | |||| ||| | || ||| || || ||| | ||||||| | ||||||||| Sbjct 1219380 GAGCCTGCTGGCGTA--TGGTAGGCACACGCTGAGCCCGCCAGTGTATCTTGCGTGCGGC 1219323 Query 182 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || ||||| ||||||||||||||||| ||||||||| Sbjct 1219322 CCCGAACAGCTAAGGGCATCACAGACGTGTTATTGC 1219287 >seq87 Length=9762952 Score = 113 bits (124), Expect = 7e-23 Identities = 164/226 (73%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || | || ||||| |||| | | |||||| |||||| | Sbjct 7155266 GTACAAAGGGCAGGGACTTAAT----GCAAGCTTC-TGACCCACACTTACTGGGAATT-C 7155213 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119 ||| | | | || ||| ||||| | ||||||||||| | || ||| | || Sbjct 7155212 CTCACTCATGGAGAATAATGGCAATCTCCCATCCCCATCACAAATGGGATTCAGTGGTTT 7155153 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| | |||| | || ||| | || || ||| |||||||||||||||||| Sbjct 7155152 ACCTGCGCCTGCCAGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 7155093 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||| | ||||||||||||||||||| |||||||||| ||||| || Sbjct 7155092 GCCCCGGACATCTAAGGGCATCACAGCCCTGTTATTG-CTCAATCT 7155048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751987848620