Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq87 123 1e-25 seq2 87.8 7e-15 >seq87 Length=9762952 Score = 123 bits (136), Expect = 1e-25 Identities = 100/120 (83%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| ||| |||||||||||||||||||||||| |||| |||||||||||||| ||| Sbjct 7159196 TGTTAGGATCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAA--CTG 7159253 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| || ||| || ||| |||| |||||| || || | ||||||||||||||| Sbjct 7159254 GTGGAGGCCCGTAGCAGTCCTGACGTGAAAATCGGTCATCCCACCTGGGTATAGGGGCGA 7159313 Score = 93.3 bits (102), Expect = 2e-16 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 48 TTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||| ||||||||||||| | | ||| |||||| | | | |||||||||||| || Sbjct 7158146 TTGCTTGGGAATGCAGCCCAGAGCGGGTGGTAAACTCCATGTAAAGCTAAATACCAGCTC 7158205 Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167 |||||| |||| ||||||| || | ||||| ||||||| |||||| | |||||||| Sbjct 7158206 GAGACCCATAGTCAACAAGTACTGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTT 7158265 Query 168 AAAAAGCACGTGAAATTGTTGAAAGGGAA 196 | | | |||||| |||| | ||| || Sbjct 7158266 CAGCAAGATGTGAAACTGTTAAGAGGTAA 7158294 >seq2 Length=38736517 Score = 87.8 bits (96), Expect = 7e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 19107839 GACCCAAAAGATGGTGAACTATGCCTGGGCAGGATGAAGCCAGAGGAAACTCTGGTGGAG 19107898 Query 630 G 630 | Sbjct 19107899 G 19107899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079964221400