Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq111 183 5e-44 seq9 181 2e-43 seq117 179 6e-43 seq11 131 3e-28 >seq111 Length=11679411 Score = 183 bits (202), Expect = 5e-44 Identities = 153/191 (80%), Gaps = 15/191 (8%) Strand=Plus/Plus Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164 ||||||||||| |||||||||||| |||| ||||||||||||| |||||||||||| Sbjct 8234510 ATCCAACGCTTGGTGAATTCTGCTTCACAATGAGAGGAAGAGCCGACGTCGAAGGATCAA 8234569 Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 8234570 AAAGCGACGTCGCTATGGACGCTCGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 8234629 Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284 ||| ||||| || | |||||||| ||||| |||||||| || Sbjct 8234630 CTGACACCTTCTGCTT---------------AAAAGGATCATGAGGCCCCACTTTCACGG 8234674 Query 285 TTTGTATTCAC 295 | ||||||||| Sbjct 8234675 TCTGTATTCAC 8234685 >seq9 Length=27858397 Score = 181 bits (200), Expect = 2e-43 Identities = 201/266 (76%), Gaps = 3/266 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||| ||||| ||||||| || ||||| || ||||||||||||||||| Sbjct 12468494 TCATCAGTAGGGTGAAACTCACCTGTCCCACGACGGAGAAATCCCAGCTCACGTTCCCTG 12468435 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||| |||| || | |||||| ||||||||||||||| | Sbjct 12468434 TTAGTGGGTGAACAATCCAATGCTTGGTAAACTGTGCTTCACAATGATAGGAAGAGCCAA 12468375 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA--T 208 | ||||| || |||| | |||||||||| |||| | ||||||| |||||| | Sbjct 12468374 TGGCAAAGGACAGAAGAGCAGCATCGCTATGAATGCTTCGTCACCACAAGTCAGTTACGT 12468315 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATA 268 || |||| ||||||||| |||||| | | ||| | | || | ||||| | | Sbjct 12468314 AGCTCTGGTCACTTTTCTGACACCTCCTACTTAAAACTCAAAAGGTCAGGAGGATTGTGA 12468255 Query 269 GGCCACACTTTCATGGTTTGTATTCA 294 |||| | |||||| || |||||||| Sbjct 12468254 GGCC-CCCTTTCACAGTCTGTATTCA 12468230 >seq117 Length=6612941 Score = 179 bits (198), Expect = 6e-43 Identities = 134/156 (86%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 1528325 TAGGCAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCAC 1528266 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTA 257 |||||||||||||| ||||||||||||||| |||||| || | ||| | | || | Sbjct 1528265 AAGCCAGTTATCCC-GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCCAAAGGTCAG 1528207 Query 258 AAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||| ||||| | |||||||||| ||||||| Sbjct 1528206 AAGGATCGTGAGGCCCCGCTTTCATGGTCTGTATTC 1528171 >seq11 Length=23434795 Score = 131 bits (144), Expect = 3e-28 Identities = 151/198 (76%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||| ||||||||| | ||||| || || || | |||| ||||||||| || Sbjct 13702228 TCATCAGTCAGGTAAAACTGTTTTATCTCACGATGGCCTGATCCCACCTCACGTTCT-TA 13702170 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||| ||||| ||||||||| || | |||||||| || || ||||||| || Sbjct 13702169 TTAGTAGGTGAGCAATCCAACACTGGGTAAGGTCTGCTTC---ATAAT--GAAGAGCTGA 13702115 Query 151 CATCGAAGGATCAAAAAGCA-ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||| ||||| |||||||| | || ||||||||| |||||| |||| |||||||| Sbjct 13702114 TATCTAAGGACTAAAAAGCAGAAGT-GCTATGAACACTTGGCCAACACATTGCAGTTATC 13702056 Query 210 CCTGTGGTAACTTTTCTG 227 | |||||||||||||||| Sbjct 13702055 CTTGTGGTAACTTTTCTG 13702038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854385748608