Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq117 370 3e-100 seq130 313 8e-83 seq118 167 8e-39 seq4 113 1e-22 seq93 109 2e-21 seq14 105 2e-20 seq38 80.6 9e-13 >seq117 Length=6612941 Score = 370 bits (410), Expect = 3e-100 Identities = 261/297 (88%), Gaps = 1/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||| |||||| || |||||| | | | ||||||||| |||||| | Sbjct 807444 CTCCCACTTATTCTACATCTCTCAT-TCTTTTCACCATGCCAGACTAGAGTTAAGCTCTA 807502 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||| || |||||||| ||||| | |||||||||| |||| ||||||| | Sbjct 807503 CAGGGTCTTCTTTCTCCTCTGATTCCACCAAGTCTGTTCCCTTGGTTGTGTTTTCGCTGG 807562 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || ||||||||||| || ||||||||||||| Sbjct 807563 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGTGCACCACTAATTAGATG 807622 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || ||| |||||||||||| ||||||||||||||||||||| || ||||||| |||| Sbjct 807623 ACAAGGTATTTGGCTACCTGAAGAGAGTCATAGTTACTCCCACCATTTACCCAAGCTTCA 807682 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 807683 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCATGTCAACA 807739 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 1528137 CTTGTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 1528078 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 1528077 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 1528031 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||| || |||| || |||| ||| ||||||||||||||| | ||| Sbjct 807139 CTTCTGCTCCACAAGAAGTTTCCGTCCTCCCTGAACTCCCCTTAGGACACCTACATTACC 807198 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| ||| || |||||| ||||||||||||||| || |||| Sbjct 807199 ATTTGACAGTTGTACCACCCCAGTCAAACTCCCCACCTGGCACTGTC 807245 >seq130 Length=7754561 Score = 313 bits (346), Expect = 8e-83 Identities = 248/297 (84%), Gaps = 3/297 (1%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||| |||| |||||| | | ||||||||| |||||||| Sbjct 1790194 CTCCCACTTAT---ACACCTCTTGAGTCTTTTCACTGTGCCAGACTAGAGTGAAGCTCAA 1790138 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||| || ||||||| ||||||| ||||| || || ||||| ||||||||| ||| | Sbjct 1790137 TGGGGACTCATTTCCCCACTGATTCTGCCAAACCTCTTTCCTTGACTGTGGTTTTGCTGG 1790078 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||||||||||||| || |||||||||||| ||| ||||||||||| Sbjct 1790077 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCATGTCCCTAATTAGATG 1790018 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || | |||||||||||| ||||||||||| |||||||| || || |||||| | |||| Sbjct 1790017 ACAAAGCATTTGGCTACTTTAAGAGAGTCTTAGTTACTTCCACCATTTACCAGAGCTTCA 1789958 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| ||||||||||||||||| | |||| || |||||||||||||| |||||| Sbjct 1789957 TTGAATTCCTTCACTTTGACATTCACACCACTAGGTAGAAATCACATTGCATCAACA 1789901 >seq118 Length=5648966 Score = 167 bits (184), Expect = 8e-39 Identities = 185/242 (76%), Gaps = 5/242 (2%) Strand=Plus/Plus Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCC-GCCAAGCCCGTTCCCTTG 340 || ||||| | ||||||| ||||||| | | | |||| ||||| || | |||||| Sbjct 1487399 TACAGTCAGGTTCAACAGC--CTTCTTTGCGCACAGATTTTTGCCAAACCA-TCCCCTTG 1487455 Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 ||||| ||||| ||||| ||| || || ||| ||||| || || |||| ||||||| Sbjct 1487456 GCTGTAGTTTCATCAGATAATAGGTAAAGAGAGTAGGAATATCATTCATCCGTTCATGCA 1487515 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GC 459 || ||||||||| | ||||||| ||||||||||||||||||||||||||| ||| | Sbjct 1487516 TATCCCTAATTAGACGGTGAGGCATGTGGCTACCTTAAGAGAGTCATAGTTACACCCATC 1487575 Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 |||||| | || | ||||| ||| || ||||||||||| ||| ||||| | ||||| Sbjct 1487576 AATTTACCTGAGCCTCAGTGAATCTCTCCATTTTGACATTCAAAGCCCTGGGGAAAAATC 1487635 Query 520 AC 521 || Sbjct 1487636 AC 1487637 >seq4 Length=32345528 Score = 113 bits (124), Expect = 1e-22 Identities = 118/152 (78%), Gaps = 10/152 (7%) Strand=Plus/Plus Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364 ||||| || |||||||| ||||||| || ||||||| ||| |||| | |||| ||| Sbjct 10450446 TCTTTGCCTGCTGATTCTGCCAAGCTAATTGCCTTGGCAGTG-TTTCCATGGATACTAGG 10450504 Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 ||||| ||||||| | || |||||| || |||||| |||||||| |||| | Sbjct 10450505 TAGGGGCAGTGGGGGTT--GT------ATTCATAGGCATCACTATTTAGATGATGAGGTA 10450556 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||| ||||| ||||||||||||||||| Sbjct 10450557 TTTGGCTATCTTAA-AGAGTCATAGTTACTCC 10450587 >seq93 Length=10942246 Score = 109 bits (120), Expect = 2e-21 Identities = 104/131 (79%), Gaps = 3/131 (2%) Strand=Plus/Minus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 || |||||||||||| |||||| || ||||||||||||| ||||||||||| | ||||| Sbjct 550856 TCTCTAATTAGATGATAAGGCATCTGACTACCTTAAGAGACTCATAGTTACT-CTGCCGT 550798 Query 463 TTA--CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||| | ||| ||||||||||| || ||||||| | | ||||||||||||||| Sbjct 550797 TTATTTACTACCTTCATTGAATTTCTTTACCCTGACATTGAATGTACTGGGCAGAAATCA 550738 Query 521 CATTGCGTCAA 531 ||| | |||| Sbjct 550737 CATCACATCAA 550727 >seq14 Length=20232028 Score = 105 bits (116), Expect = 2e-20 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 |||||||||||| |||||||||||| || ||||||| | |||| ||||||||||||||| Sbjct 6554553 ACCTTAAGAGAGGCATAGTTACTCCTGCTGTTTACCTGTGCTTCCTTGAATTTCTTCACT 6554494 Query 492 TTGACATTCAGAGCAC 507 |||||||||||||||| Sbjct 6554493 TTGACATTCAGAGCAC 6554478 >seq38 Length=15623999 Score = 80.6 bits (88), Expect = 9e-13 Identities = 70/87 (80%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367 |||| | ||||||| ||||||| |||||||||||| ||||| | ||| ||||| ||| Sbjct 14817627 TTCCTTGATGATTCCAGCAAGCCCAGTCCCTTGGCTGTAGTTTCTCCAGACAGTAGGTAG 14817686 Query 368 GGACAGTGGGAATCTCGTTAATCCATT 394 ||| | ||| |||||| || ||||||| Sbjct 14817687 GGAGAATGGAAATCTCATTCATCCATT 14817713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635172724864