Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31]
1,668 sequences; 2,372,919,875 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq117 370 3e-100
seq130 313 8e-83
seq118 167 8e-39
seq4 113 1e-22
seq93 109 2e-21
seq14 105 2e-20
seq38 80.6 9e-13
>seq117
Length=6612941
Score = 370 bits (410), Expect = 3e-100
Identities = 261/297 (88%), Gaps = 1/297 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||||||||| |||||| || |||||| | | | ||||||||| |||||| |
Sbjct 807444 CTCCCACTTATTCTACATCTCTCAT-TCTTTTCACCATGCCAGACTAGAGTTAAGCTCTA 807502
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||| || |||||||| ||||| | |||||||||| |||| ||||||| |
Sbjct 807503 CAGGGTCTTCTTTCTCCTCTGATTCCACCAAGTCTGTTCCCTTGGTTGTGTTTTCGCTGG 807562
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||||||||||||||||| || ||||||||||| || |||||||||||||
Sbjct 807563 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGTGCACCACTAATTAGATG 807622
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
|| ||| |||||||||||| ||||||||||||||||||||| || ||||||| ||||
Sbjct 807623 ACAAGGTATTTGGCTACCTGAAGAGAGTCATAGTTACTCCCACCATTTACCCAAGCTTCA 807682
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 807683 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCATGTCAACA 807739
Score = 116 bits (128), Expect = 1e-23
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 1528137 CTTGTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 1528078
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||||||| ||||||||||||||| || ||||
Sbjct 1528077 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 1528031
Score = 89.7 bits (98), Expect = 2e-15
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||| || |||| || |||| ||| ||||||||||||||| | |||
Sbjct 807139 CTTCTGCTCCACAAGAAGTTTCCGTCCTCCCTGAACTCCCCTTAGGACACCTACATTACC 807198
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| || |||||| ||||||||||||||| || ||||
Sbjct 807199 ATTTGACAGTTGTACCACCCCAGTCAAACTCCCCACCTGGCACTGTC 807245
>seq130
Length=7754561
Score = 313 bits (346), Expect = 8e-83
Identities = 248/297 (84%), Gaps = 3/297 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||| |||||||| |||| |||||| | | ||||||||| ||||||||
Sbjct 1790194 CTCCCACTTAT---ACACCTCTTGAGTCTTTTCACTGTGCCAGACTAGAGTGAAGCTCAA 1790138
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||| || ||||||| ||||||| ||||| || || ||||| ||||||||| ||| |
Sbjct 1790137 TGGGGACTCATTTCCCCACTGATTCTGCCAAACCTCTTTCCTTGACTGTGGTTTTGCTGG 1790078
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||||||||||||||||| || |||||||||||| ||| |||||||||||
Sbjct 1790077 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCATGTCCCTAATTAGATG 1790018
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
|| | |||||||||||| ||||||||||| |||||||| || || |||||| | ||||
Sbjct 1790017 ACAAAGCATTTGGCTACTTTAAGAGAGTCTTAGTTACTTCCACCATTTACCAGAGCTTCA 1789958
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||| ||||||||||||||||| | |||| || |||||||||||||| ||||||
Sbjct 1789957 TTGAATTCCTTCACTTTGACATTCACACCACTAGGTAGAAATCACATTGCATCAACA 1789901
>seq118
Length=5648966
Score = 167 bits (184), Expect = 8e-39
Identities = 185/242 (76%), Gaps = 5/242 (2%)
Strand=Plus/Plus
Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCC-GCCAAGCCCGTTCCCTTG 340
|| ||||| | ||||||| ||||||| | | | |||| ||||| || | ||||||
Sbjct 1487399 TACAGTCAGGTTCAACAGC--CTTCTTTGCGCACAGATTTTTGCCAAACCA-TCCCCTTG 1487455
Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400
||||| ||||| ||||| ||| || || ||| ||||| || || |||| |||||||
Sbjct 1487456 GCTGTAGTTTCATCAGATAATAGGTAAAGAGAGTAGGAATATCATTCATCCGTTCATGCA 1487515
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GC 459
|| ||||||||| | ||||||| ||||||||||||||||||||||||||| ||| |
Sbjct 1487516 TATCCCTAATTAGACGGTGAGGCATGTGGCTACCTTAAGAGAGTCATAGTTACACCCATC 1487575
Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519
|||||| | || | ||||| ||| || ||||||||||| ||| ||||| | |||||
Sbjct 1487576 AATTTACCTGAGCCTCAGTGAATCTCTCCATTTTGACATTCAAAGCCCTGGGGAAAAATC 1487635
Query 520 AC 521
||
Sbjct 1487636 AC 1487637
>seq4
Length=32345528
Score = 113 bits (124), Expect = 1e-22
Identities = 118/152 (78%), Gaps = 10/152 (7%)
Strand=Plus/Plus
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||| || |||||||| ||||||| || ||||||| ||| |||| | |||| |||
Sbjct 10450446 TCTTTGCCTGCTGATTCTGCCAAGCTAATTGCCTTGGCAGTG-TTTCCATGGATACTAGG 10450504
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||| ||||||| | || |||||| || |||||| |||||||| |||| |
Sbjct 10450505 TAGGGGCAGTGGGGGTT--GT------ATTCATAGGCATCACTATTTAGATGATGAGGTA 10450556
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
|||||||| ||||| |||||||||||||||||
Sbjct 10450557 TTTGGCTATCTTAA-AGAGTCATAGTTACTCC 10450587
>seq93
Length=10942246
Score = 109 bits (120), Expect = 2e-21
Identities = 104/131 (79%), Gaps = 3/131 (2%)
Strand=Plus/Minus
Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462
|| |||||||||||| |||||| || ||||||||||||| ||||||||||| | |||||
Sbjct 550856 TCTCTAATTAGATGATAAGGCATCTGACTACCTTAAGAGACTCATAGTTACT-CTGCCGT 550798
Query 463 TTA--CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
||| | ||| ||||||||||| || ||||||| | | |||||||||||||||
Sbjct 550797 TTATTTACTACCTTCATTGAATTTCTTTACCCTGACATTGAATGTACTGGGCAGAAATCA 550738
Query 521 CATTGCGTCAA 531
||| | ||||
Sbjct 550737 CATCACATCAA 550727
>seq14
Length=20232028
Score = 105 bits (116), Expect = 2e-20
Identities = 69/76 (91%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491
|||||||||||| |||||||||||| || ||||||| | |||| |||||||||||||||
Sbjct 6554553 ACCTTAAGAGAGGCATAGTTACTCCTGCTGTTTACCTGTGCTTCCTTGAATTTCTTCACT 6554494
Query 492 TTGACATTCAGAGCAC 507
||||||||||||||||
Sbjct 6554493 TTGACATTCAGAGCAC 6554478
>seq38
Length=15623999
Score = 80.6 bits (88), Expect = 9e-13
Identities = 70/87 (80%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367
|||| | ||||||| ||||||| |||||||||||| ||||| | ||| ||||| |||
Sbjct 14817627 TTCCTTGATGATTCCAGCAAGCCCAGTCCCTTGGCTGTAGTTTCTCCAGACAGTAGGTAG 14817686
Query 368 GGACAGTGGGAATCTCGTTAATCCATT 394
||| | ||| |||||| || |||||||
Sbjct 14817687 GGAGAATGGAAATCTCATTCATCCATT 14817713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635172724864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |