Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq82 120 2e-22 seq114 102 6e-17 seq71 95.1 1e-14 >seq82 Length=8814989 Score = 120 bits (132), Expect = 2e-22 Identities = 589/922 (64%), Gaps = 53/922 (6%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGT--CGTTTCGTATTGTTCCCCATCGAGTATGA 61082 ||||||| || || | |||| || | | || || || | || || ||||| || Sbjct 1281929 ATGAACCACTCTTCTGAAAGAAACCCCCTGCCGCTTTGTCATCTTTCCTATCGAATACCG 1281870 Query 61083 GGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGA 61142 ||| |||||| ||||| || || ||||| |||||||||||||| | |||||| | || Sbjct 1281869 TGATGTTTGGCAGATGTATAAGAAAGCGGAGGCTTCCTTCTGGACAGCTGAGGAGCTGGA 1281810 Query 61143 TTTGTCCAAAGACATGAATGACTGGGA-GCGTTTATCGAGCGGTGAACA---ACATTTCA 61198 | ||||| ||||| | |||||| || | | ||| |||| | | ||||| Sbjct 1281809 CCTTTCCAAGGACATTCAGCCCTGGGAAGCCCTGA---AGCC-TGAAGAGAGATGTTTCA 1281754 Query 61199 TTAAACATGTGTT--GGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATT 61256 | | |||||| ||| |||| ||| || || | || || ||||| || || Sbjct 1281753 CTT--CGTGTGTTCTGGCTTTCTCTGCAGCAAGTGATAGCATAGTAAATGAAAACTT--- 1281699 Query 61257 GGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| || | |||| || |||| |||||| |||||||| || Sbjct 1281698 ------------------GGTTCAGATTACGGAAGCCCGTTATTTCTATGGCTTCCAAAT 1281657 Query 61317 TGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 |||| |||| || | || || || ||| ||||| | ||||| || || ||||| | || Sbjct 1281656 TGCCGTGGAAAACATACATTCTGAAATGGACAGTCTCCTCATTGACACTTACATTAAAGA 1281597 Query 61377 GCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAA 61436 ||| | ||| | |||||||||| ||||| | || | || ||| | Sbjct 1281596 TTCCAAAGAAAGGGAATTCCTCTTCAATGCCAGTGAGACAGTGCCTTCTGTAAAGAAGGC 1281537 Query 61437 AGCGGATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTG 61494 || ||||||||||| |||| | | |||| |||||| | || ||||| | Sbjct 1281536 GGCAGATTGGGCCTTGCGCCGGAT--CGAAGACAAAGAGGCTACGTACGGAGAACGTGTC 1281479 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || ||||| | | || || | || || ||| || ||||| | | || ||| Sbjct 1281478 GTAGCCTTTGCCGCAGCGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCTGTATTGTGG 1281419 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGA 61613 | |||||||| ||||| ||| |||| || || || ||||| | || || || | || Sbjct 1281418 CTCAAGAAACGAGGACTCATGTCCGGCCTCACATTTTCCAATGAACTTATTAGCA-GAGA 1281360 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673 |||||| | || ||||| ||||| || | ||||||| | || || ||| Sbjct 1281359 CGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACACCTGCTACACAAACGT-- 1281302 Query 61674 GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAG-GCGGTAACTATCGAACAGGAATTTC 61732 |||||| || | || || | | |||| || || | | | ||||| || || | Sbjct 1281301 -TCGGAGCAGAGAGTCAAAGA-AATAATCGTCAGTGCAGCTAGGACAGAACACGAGTTCC 1281244 Query 61733 TGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATA 61792 | || || || || | || |||||||| |||||||| | | ||| |||||| Sbjct 1281243 TCACGGAGGCCCTGACAGTGGAGCTCATCGGGATGAATTGCGCTTTGATGAAGCAGTACG 1281184 Query 61793 TTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGC--GGATCT-ATAATA 61849 | ||||| || || ||| | || || | || ||||| | ||| || | | | | || Sbjct 1281183 TCGAATTCGTGGCAGACAGACTTATGCTGGAGCTGGGT-TTTAGCAAGGTTTTCAGAGTA 1281125 Query 61850 CGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCG 61909 |||| |||||||| || ||||| ||||| || || || ||||| || || || | Sbjct 1281124 --GAAAATCCATTTGACTTTATGGAGGCTATTTCACT-GAAGGGAAGACTAACTTCTTTG 1281068 Query 61910 AGAAACGTGTAGGCGACTATCA 61931 |||| | ||||| | ||||| Sbjct 1281067 AGAAGAGACTAGGCAAGTATCA 1281046 >seq114 Length=7505490 Score = 102 bits (112), Expect = 6e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 |||||| || || ||||| |||||||| || ||||| || || || | ||||| || Sbjct 203328 GGTATATTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCTAGGTTCTGCTG 203387 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| || Sbjct 203388 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 203447 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 203448 AGACTCAATGATGGCATACCAAAG 203471 >seq71 Length=10149521 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | ||||| || |||||||| ||||| || ||| ||| || ||| Sbjct 1778688 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAAAAT 1778747 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 1778748 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 1778794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559917939520