Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ovis_20aries_20[refseq_20GCF_5F000298735.2_202015-11-20] 5,466 sequences; 2,615,516,299 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq24 140 1e-31 seq19 136 2e-30 seq25 80.6 1e-13 >seq24 Length=41976827 Score = 140 bits (154), Expect = 1e-31 Identities = 85/90 (94%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35636613 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 35636672 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGG 90 ||||||||||||||| | | |||| | ||| Sbjct 35636673 CCGAATCCCCGCCCCCCCGGGGGGGGGGGG 35636702 >seq19 Length=60445663 Score = 136 bits (150), Expect = 2e-30 Identities = 75/75 (100%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4901312 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 4901253 Query 61 CCGAATCCCCGCCCC 75 ||||||||||||||| Sbjct 4901252 CCGAATCCCCGCCCC 4901238 >seq25 Length=45223504 Score = 80.6 bits (88), Expect = 1e-13 Identities = 69/82 (84%), Gaps = 5/82 (6%) Strand=Plus/Plus Query 12 TAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAG---AGCCCAGCGCCGAATCC 68 |||||||||||||||||||||||||||||||||||||||| |||| || ||| || Sbjct 33145250 TAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGCCCCGCCCCGC-CCGCCCCC 33145308 Query 69 CCGCCCCGCGGTGGGGCGCGGG 90 ||||||| ||| |||| | ||| Sbjct 33145309 CCGCCCC-CGGGGGGGGGGGGG 33145329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230388193440