Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ovis_20aries_20[refseq_20GCF_5F000298735.2_202015-11-20] 5,466 sequences; 2,615,516,299 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq15 120 2e-22 seq9 89.7 4e-13 >seq15 Length=80783214 Score = 120 bits (132), Expect = 2e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || ||||| ||||| ||||| ||||| || Sbjct 49189826 GGTATACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAAGTTCTGCTG 49189885 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| || Sbjct 49189886 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 49189945 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 49189946 AGACTCAATGATGGCATACCAAAG 49189969 >seq9 Length=94583238 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||| || || || | ||||| || |||||||| ||||| || ||| ||| |||||| Sbjct 74655899 CAGGAAGTACAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 74655958 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 74655959 GTGCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 74656005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397541515262240