Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16]
50,377 sequences; 2,578,019,207 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq44424 163 5e-38
seq272 96.9 6e-18
seq69 95.1 2e-17
>seq44424
Length=209
Score = 163 bits (180), Expect = 5e-38
Identities = 134/162 (83%), Gaps = 1/162 (1%)
Strand=Plus/Plus
Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216
||||| |||||| | ||| || ||||||||||| ||||| ||||||||| | ||
Sbjct 1 CTATTCTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGT 60
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
||| || |||||||||||||||||||||||||| ||||| ||| ||||||||||| ||
Sbjct 61 ATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATT 120
Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||||||||| ||||||||||| ||||
Sbjct 121 TGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 161
>seq272
Length=443556
Score = 96.9 bits (106), Expect = 6e-18
Identities = 177/256 (69%), Gaps = 5/256 (2%)
Strand=Plus/Minus
Query 49 CTGGGTGTGCCGGGGAGCCAG-GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG 107
||| |||| || || ||| | | | |||||| ||||| ||||||| |||||||||||||
Sbjct 237889 CTGAGTGTCCCATGGGGCCTGAGGCATTTACTCTGAAACAATTAGAATGTTCAAAGCAGG 237830
Query 108 C---CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 164
| | | ||||| ||| |||||||| || || ||| ||| |||||||| ||
Sbjct 237829 CAGGAGTCACATAGATACAGAAGCCAGGAATAATGGAGTAAGAC-TGCAGTTCTATTCTG 237771
Query 165 TTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224
||||||||| | || | | || ||||| ||| |||| | ||| | |||| |
Sbjct 237770 TTGGTTTCTGGAACTGAGGGCATAATTAAGAGGAATAGCCAGGGACATTCATATTGCAGC 237711
Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284
| |||||||||||||||| | | |||| || | | ||| || |||||
Sbjct 237710 ACTACAGGTGAAATTCTTGGACTGGTGCAAGATGGACAAGAGTAAAATTATTTGCCAAGA 237651
Query 285 ATGTTTTCATTAATCA 300
|||||||||||| |||
Sbjct 237650 ATGTTTTCATTACTCA 237635
>seq69
Length=12658979
Score = 95.1 bits (104), Expect = 2e-17
Identities = 158/226 (70%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATG 131
||||||||| ||||||||||||||| | ||||| ||| | || | || ||
Sbjct 9036545 TTTACTTTGGAAAAATTAGAGTGTTTGATGCAGGATCAAGCTGCTGCATTCGGCAG-ATA 9036603
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
|||||||||||||| | |||||| |||||||| || | | || | || ||||||
Sbjct 9036604 CGCTAATAGAATAGGACTTCTGGTTCTGCTTTGTTGGCTTTTGGAACTGAAGTCATGATT 9036663
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|| | |||| ||| |||| | | ||| | ||| ||||||||||||| |||| | |
Sbjct 9036664 AAAAAGGATGGTCCTGGGTATTGGAATTAAGTTGCTAGAGGTGAAATTCGTGGAACTTTG 9036723
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297
|||| || | | | |||| || ||||| || |||| |||||
Sbjct 9036724 CAAGATGGACCAGAGTGGAAGCATTTGCCAAGAATATTTTTATTAA 9036769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914738949696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |