Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16]
50,377 sequences; 2,578,019,207 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq160 100 1e-18
seq17 84.2 9e-14
seq127 77.0 1e-11
>seq160
Length=2410589
Score = 100 bits (110), Expect = 1e-18
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| | ||| |||||||| |||||||||| || ||| ||||||||||||| ||||||
Sbjct 2355178 TGTTAGTACCTGAAAGATGATGAACTATGCTTGGGGAGGTTGAAGCCAGAGGACACTCTG 2355119
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | || ||| ||| | ||||||| | | ||| || ||||||||| || ||
Sbjct 2355118 GTGGAGGTCCCTAGAGGTCCTGACATGCAAATTGGTTGTCCAACCTGGGTATAGAGGGGA 2355059
>seq17
Length=30241141
Score = 84.2 bits (92), Expect = 9e-14
Identities = 59/66 (89%), Gaps = 1/66 (2%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct 6718789 TGTTAGGACCCGAAAGATGGTGAACTATGCTTGGGCAGGGCGAAGCCAGAGGAAACTCTG 6718848
Query 624 G-TGGA 628
| ||||
Sbjct 6718849 GCTGGA 6718854
>seq127
Length=4658995
Score = 77.0 bits (84), Expect = 1e-11
Identities = 73/91 (80%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAAT-GGGAGGTAAATTTCTTCTAAAGCTAAA 98
|||||| |||| ||||||||||||| | ||| ||| |||||| | | ||||| ||||||
Sbjct 34 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAAGCGGGTGGTAAACTCCATCTAAGGCTAAA 93
Query 99 TATTGGCCAGAGACCGATAG-CGCACAAGTA 128
|| ||| ||||||||||| | |||||||
Sbjct 94 TACCGGCACGAGACCGATAGTCAAACAAGTA 124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078919413350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |