Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq207 125 3e-27 seq160 71.6 6e-11 >seq207 Length=1168838 Score = 125 bits (138), Expect = 3e-27 Identities = 87/99 (88%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCG 63 ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| | Sbjct 764180 AAAGAAACTAACCAGGATTCCCTCAAGAATGGCGAATGAACAGGGAAGAGCCCAGCGCTG 764239 Query 64 AATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| |||| | ||||||| | ||| ||||||| || Sbjct 764240 AATCCCCACCCCACAGTGGGGCACAGGAAATGTGGCATA 764278 >seq160 Length=2410589 Score = 71.6 bits (78), Expect = 6e-11 Identities = 57/69 (83%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61 |||||||||||||| |||||||| |||| || |||||||||||||||| | |||| | Sbjct 2355666 GAAAAGAAACTAACTAGGATTCCTTCAGCAATCAGGAGTGAACAGGGAAGAACTCAGCAC 2355607 Query 62 CGAATCCCC 70 | ||| ||| Sbjct 2355606 CAAATTCCC 2355598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230291185680