Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 8e-17 seq120 91.5 3e-16 >seq5 Length=45903626 Score = 93.3 bits (102), Expect = 8e-17 Identities = 155/217 (71%), Gaps = 9/217 (4%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGACA 172 |||| | ||||| |||||||||||||||| |||||| | |||| | |||||| |||| Sbjct 13425516 GCAACAGCAGGTTGGTGATGCCCTTAGATG-TCTGGGACTGCACATGTGCTACAGTGACC 13425574 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCG 231 | || | | | || ||| ||| || || | | ||||| | ||| ||| ||| | | Sbjct 13425575 GGTCCCGCATGCGCCTCCCCTCGGCTGGCAGATGT-GGTAA-CCTGTCGAACCCTGTTGG 13425632 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 | ||||||| | | ||||||||| || | | | | ||||||| || | ||| || | | Sbjct 13425633 GGATGGGGATTGGGGATTGCAATTTTTCCCCATGAGTGAGGAATTCCCAATAAACGTGGG 13425692 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||| || |||| ||||||||| |||||| Sbjct 13425693 TCATAAGCTAGC----ATTAAGTCCCTGCCATTTGTA 13425725 >seq120 Length=5385341 Score = 91.5 bits (100), Expect = 3e-16 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183 |||||||||||||||||||||| |||| ||| || |||||||| | | || | | Sbjct 2405975 GTCTGTGATGCCCTTAGATGTTGCGGGCTACACACGTACTACACTGCCTGGCTCAGCATG 2406034 Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243 | | | ||| |||| |||| | ||| | | || | | || || |||||| Sbjct 2406035 TGCCTACCCTACACCGGCAGGTGCAGATAACCCATTGAACCCCACTCATGACGGGGATCA 2406094 Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGC 303 | |||||||||||| | | | ||| |||||| || ||||||| | ||||| | | Sbjct 2406095 GGGATTGCAATTATTCCCCATGAACAAGGAATTCCCAGTAAGCACAGGTCATAAACTTCT 2406154 Query 304 GTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| | |||||||| ||||| Sbjct 2406155 GTTGATTAAGCCCCTGCCCATTGTA 2406179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946722829056