Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16]
50,377 sequences; 2,578,019,207 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq5 93.3 8e-17
seq120 91.5 3e-16
>seq5
Length=45903626
Score = 93.3 bits (102), Expect = 8e-17
Identities = 155/217 (71%), Gaps = 9/217 (4%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGACA 172
|||| | ||||| |||||||||||||||| |||||| | |||| | |||||| ||||
Sbjct 13425516 GCAACAGCAGGTTGGTGATGCCCTTAGATG-TCTGGGACTGCACATGTGCTACAGTGACC 13425574
Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCG 231
| || | | | || ||| ||| || || | | ||||| | ||| ||| ||| | |
Sbjct 13425575 GGTCCCGCATGCGCCTCCCCTCGGCTGGCAGATGT-GGTAA-CCTGTCGAACCCTGTTGG 13425632
Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291
| ||||||| | | ||||||||| || | | | | ||||||| || | ||| || | |
Sbjct 13425633 GGATGGGGATTGGGGATTGCAATTTTTCCCCATGAGTGAGGAATTCCCAATAAACGTGGG 13425692
Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| ||| || |||| ||||||||| ||||||
Sbjct 13425693 TCATAAGCTAGC----ATTAAGTCCCTGCCATTTGTA 13425725
>seq120
Length=5385341
Score = 91.5 bits (100), Expect = 3e-16
Identities = 143/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183
|||||||||||||||||||||| |||| ||| || |||||||| | | || | |
Sbjct 2405975 GTCTGTGATGCCCTTAGATGTTGCGGGCTACACACGTACTACACTGCCTGGCTCAGCATG 2406034
Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243
| | | ||| |||| |||| | ||| | | || | | || || ||||||
Sbjct 2406035 TGCCTACCCTACACCGGCAGGTGCAGATAACCCATTGAACCCCACTCATGACGGGGATCA 2406094
Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGC 303
| |||||||||||| | | | ||| |||||| || ||||||| | ||||| | |
Sbjct 2406095 GGGATTGCAATTATTCCCCATGAACAAGGAATTCCCAGTAAGCACAGGTCATAAACTTCT 2406154
Query 304 GTTGATTACGTCCCTGCCCTTTGTA 328
|||||||| | |||||||| |||||
Sbjct 2406155 GTTGATTAAGCCCCTGCCCATTGTA 2406179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946722829056
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |