Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16]
50,377 sequences; 2,578,019,207 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 2e-20
seq283 86.0 2e-14
>seq5
Length=45903626
Score = 105 bits (116), Expect = 2e-20
Identities = 117/152 (77%), Gaps = 12/152 (8%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
||||| |||||||||||| || ||||| ||||||| | || || |||||||||
Sbjct 13424526 ACTCACTCCAATTACAAGGCCTGGAAAGAATCCTGTATTACCTTTCAT---CACTACCTC 13424470
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| | ||| || ||||||| || | ||||||| ||| |||||||||||| | |||
Sbjct 13424469 CCAG-GTCAGG------TAATTTGTGCAC-TGCTGCCCTCCCTGGATGTGGTAGTCATTT 13424418
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153
||||||||||||||| ||| || |||||| ||
Sbjct 13424417 CTCAGGCTCCCTCTCTGGAGTCAAACCCTGAT 13424386
Score = 87.8 bits (96), Expect = 5e-15
Identities = 81/103 (79%), Gaps = 5/103 (5%)
Strand=Plus/Minus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA-----GGTACTATCAAA 398
||||||||||| |||||||||| || ||||| || |||| | || || | ||||
Sbjct 17642663 GCATGTATTAGTTCTAGAATTATCATAGTTATTCAAGTAGGAGAGGAGGGAACAACCAAA 17642604
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441
||| |||||||||||||||||||||| | ||||| ||||||
Sbjct 17642603 GGAACCATAACTGATTTAATGAGCCATTTGTAGTTTTACTGTA 17642561
>seq283
Length=342840
Score = 86.0 bits (94), Expect = 2e-14
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA 141
|||| | |||||||||||||| |||| ||||||||| ||||||||||||||| |||||||
Sbjct 89596 TTTGGGTGCCTGCTGCCTTCCCTGGACGTGGTAGCCCTTTCTCAGGCTCCCTTTCCGGAA 89537
Query 142 TCGAACCCTAATTCCCC 158
| |||| ||| |||
Sbjct 89536 CTGTACCCAGATTTCCC 89520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509639105792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |