Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq5 105 2e-20 seq283 86.0 2e-14 >seq5 Length=45903626 Score = 105 bits (116), Expect = 2e-20 Identities = 117/152 (77%), Gaps = 12/152 (8%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||| |||||||||||| || ||||| ||||||| | || || ||||||||| Sbjct 13424526 ACTCACTCCAATTACAAGGCCTGGAAAGAATCCTGTATTACCTTTCAT---CACTACCTC 13424470 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | ||| || ||||||| || | ||||||| ||| |||||||||||| | ||| Sbjct 13424469 CCAG-GTCAGG------TAATTTGTGCAC-TGCTGCCCTCCCTGGATGTGGTAGTCATTT 13424418 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 ||||||||||||||| ||| || |||||| || Sbjct 13424417 CTCAGGCTCCCTCTCTGGAGTCAAACCCTGAT 13424386 Score = 87.8 bits (96), Expect = 5e-15 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA-----GGTACTATCAAA 398 ||||||||||| |||||||||| || ||||| || |||| | || || | |||| Sbjct 17642663 GCATGTATTAGTTCTAGAATTATCATAGTTATTCAAGTAGGAGAGGAGGGAACAACCAAA 17642604 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 ||| |||||||||||||||||||||| | ||||| |||||| Sbjct 17642603 GGAACCATAACTGATTTAATGAGCCATTTGTAGTTTTACTGTA 17642561 >seq283 Length=342840 Score = 86.0 bits (94), Expect = 2e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA 141 |||| | |||||||||||||| |||| ||||||||| ||||||||||||||| ||||||| Sbjct 89596 TTTGGGTGCCTGCTGCCTTCCCTGGACGTGGTAGCCCTTTCTCAGGCTCCCTTTCCGGAA 89537 Query 142 TCGAACCCTAATTCCCC 158 | |||| ||| ||| Sbjct 89536 CTGTACCCAGATTTCCC 89520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509639105792