Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq18 111 1e-19 seq53 98.7 8e-16 seq1 82.4 6e-11 >seq18 Length=30197870 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || ||||| || || |||| ||||| || Sbjct 1319344 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTG 1319403 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| || Sbjct 1319404 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 1319463 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 1319464 AGACTCAATGATGGCATACCAAAG 1319487 >seq53 Length=17124947 Score = 98.7 bits (108), Expect = 8e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||| || || | ||||| || |||||||| ||||| || ||| ||| |||||| Sbjct 11538047 CAGGAGGTTCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 11538106 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || ||||||||||| || Sbjct 11538107 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACGTACATCAGAGA 11538153 >seq1 Length=84051066 Score = 82.4 bits (90), Expect = 6e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 |||| || || | | ||| || |||||||| || || | || || |||||||| | | Sbjct 77634056 ATGAGCCACTGCTCCGAGAAAACCCTCGTCGCTTTGTCATCTTTCCTATCGAGTACCATG 77633997 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 ||||||||| ||||| || || ||||| |||||||||||||| | || ||||| Sbjct 77633996 ATATTTGGCAGATGTATAAGAAAGCGGAGGCTTCCTTCTGGACAGCCGAAGAGGT 77633942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397323905299280