Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq62 98.7 4e-15 >seq62 Length=14533578 Score = 98.7 bits (108), Expect = 4e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||||| |||| ||||||||||||||||||||| | || ||||| ||||||| Sbjct 11629345 CTCCTTGAGTCGCGGCACGCCCAGGGTCACGTTCTTGGCAGACACACCGGCGTAGTGGAA 11629404 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | | ||||| ||| ||| ||| || || | | |||| | || ||| || || Sbjct 11629405 GGTGTTCAAGGTCATCTGGGTGGCGGGTTCTCCAAGGGACTGTGCAGCCAGGGCCCCCAC 11629464 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 11629465 CATCTCCCCGGG 11629476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083360774349846