Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq744 102 1e-19
seq702 100 5e-19
>seq744
Length=468425
Score = 102 bits (112), Expect = 1e-19
Identities = 178/256 (70%), Gaps = 5/256 (2%)
Strand=Plus/Minus
Query 49 CTGGGTGTGCCGGGGAGCCAG-GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG 107
||| |||| || || ||| | | | |||||| ||||| ||||||| |||||||||||||
Sbjct 108596 CTGAGTGTCCCATGGGGCCTGAGGCATTTACTCTGAAACAATTAGAATGTTCAAAGCAGG 108537
Query 108 C---CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 164
| | | ||||| ||| |||||||| || || ||| ||| |||||||| ||
Sbjct 108536 CAGGAGTCACATAGATACAGAAGCCAGGAATAATGGAGTAAGAC-TGCAGTTCTATTCTG 108478
Query 165 TTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATT 224
||||||||| | || | | || ||||| ||| |||| | ||| | | |||| |
Sbjct 108477 TTGGTTTCTGGAACTGAGGGCATAATTAAGAGGAATAGCCAGGGATATTCATATTGCAGC 108418
Query 225 GTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284
| |||||||||||||||| | | |||| || | | ||| || |||||
Sbjct 108417 ACTACAGGTGAAATTCTTGGACTGGTGCAAGATGGACAAGAGTAAAATTATTTGCCAAGA 108358
Query 285 ATGTTTTCATTAATCA 300
|||||||||||| |||
Sbjct 108357 ATGTTTTCATTACTCA 108342
>seq702
Length=8706000
Score = 100 bits (110), Expect = 5e-19
Identities = 159/226 (70%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATG 131
||||||||| ||||||||||||||| | ||||| ||| | || | || ||
Sbjct 7958439 TTTACTTTGGAAAAATTAGAGTGTTTGATGCAGGATCAAGCTGCTGCATTCGGCAG-ATA 7958497
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
| |||||||||||||| | |||||| |||||||| || | | || | || ||||||
Sbjct 7958498 CACTAATAGAATAGGACTTCTGGTTCTGCTTTGTTGGCTTTTGGAACTGAAGTCATGATT 7958557
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|| | |||| ||| |||| | | ||| | ||| ||||||||||||| |||| | |
Sbjct 7958558 AAAAAGGATGGTCCTGGGTATTGGAATTAAGTTGCTAGAGGTGAAATTCGTGGAACTTTG 7958617
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297
|||| || | | | |||| || ||||| || |||| |||||
Sbjct 7958618 CAAGATGGACCAGAGTGGAAGCATTTGCCAAGAATATTTTTATTAA 7958663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915186464192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |