Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq653 100 1e-18 seq598 86.0 3e-14 seq736 84.2 9e-14 >seq653 Length=2310022 Score = 100 bits (110), Expect = 1e-18 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| | ||| |||||||| |||||||||| || ||| ||||||||||||| |||||| Sbjct 48729 TGTTAGTACCTGAAAGATGATGAACTATGCTTGGGGAGGTTGAAGCCAGAGGACACTCTG 48788 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| | || ||| ||| | ||||||| | | ||| || ||||||||| || || Sbjct 48789 GTGGAGGTCCCTAGAGGTCCTGACATGCAAATTGGTTGTCCAACCTGGGTATAGAGGGGA 48848 >seq598 Length=11060232 Score = 86.0 bits (94), Expect = 3e-14 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG 634 |||||||||||||||||| ||| |||||||||||| |||||||| |||| |||| | Sbjct 1115229 GAAAGATGGTGAACTATGTCTGGGAAGGGTGAAGCCAAAGGAAACT-TGGTAGAGGTCTG 1115171 Query 635 CAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || ||| ||| |||||||| | || || | || |||||||||| Sbjct 1115170 TAGTGGTCCTGATGTGCAAATTGGTCATCTGACCTGTGTATAGGGGC 1115124 >seq736 Length=17690867 Score = 84.2 bits (92), Expect = 9e-14 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| ||||||||||||||||||||||||| || |||| ||||||||||||||||||| Sbjct 3851043 TGTTAGGACCCGAAAGATGGTGAACTATGCTTGGGCAGGGCGAAGCCAGAGGAAACTCTG 3851102 Query 624 G-TGGA 628 | |||| Sbjct 3851103 GCTGGA 3851108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079968275450