Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq648 158 2e-36
seq704 105 1e-20
seq744 80.6 4e-13
>seq648
Length=20061788
Score = 158 bits (174), Expect = 2e-36
Identities = 95/100 (95%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 13457692 GTCTCATTCGTTATTGGAATTAACCAGACAAATCACTCCACCAGCTAAGAACGGCCATGC 13457633
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| ||||||||||||||| ||||||||||||
Sbjct 13457632 ACCACCACCCACAGAATCAAGAAAGAGATATCAATCTGTC 13457593
>seq704
Length=970608
Score = 105 bits (116), Expect = 1e-20
Identities = 168/237 (71%), Gaps = 12/237 (5%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGG-CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73
|||| |||||| | |||| | |||||| ||||||||||| |||| ||||| | ||||
Sbjct 940656 GTCACTGTAGCACATGTGCAGTCCCAGA-CATCTAAGGGCGTCACCAACCTGCTGTTGCT 940598
Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133
||| || | |||| | ||| | |||||||| | || | | | || |||
Sbjct 940597 --AAATCTCGGATAGCTGAACACCACTTGTCCCTCTCAAGAGTTTGAAA--ATGCAGAGT 940542
Query 134 CG------ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| ||| ||| |||||| | | ||||| |||| || |||||| |||||||
Sbjct 940541 TGGGGCTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCGATACTGGAATTTACCAGAC 940482
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244
||||| |||||||| |||||| ||||| ||||| ||||| | |||||||||||||
Sbjct 940481 AAATCCCTCCACCACGTAAGAATGGCCACACACCAACACCCTTGGAATCAAGAAAGA 940425
>seq744
Length=468425
Score = 80.6 bits (88), Expect = 4e-13
Identities = 83/109 (76%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | | || ||| ||||| | |||||||||| ||||| |||||| |
Sbjct 93209 CTAGTTAGCATGCCAGAGCCTTGTTTGTTATTGAAATTAACCAGGCAAATTGCTCCACAA 93268
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
||||| | ||||||| ||||||| || |||| ||||||||||||
Sbjct 93269 ACTAAAACTGGCCATGTACCACCATGCACAGAAATGGGAAAGAGCTATC 93317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796788583599
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |