Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq653 242 6e-62
seq643 183 5e-44
seq724 82.4 1e-13
>seq653
Length=2310022
Score = 242 bits (268), Expect = 6e-62
Identities = 211/261 (81%), Gaps = 1/261 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| | | |||||| | |||||||||||||||
Sbjct 51389 TCATCAGTAGGGTAAAACTAACCTGTCTCACCAGGATCTAAATCTAGCTCACGTTCCCTA 51330
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
|||| ||| |||||||||| |||| |||||||||||| ||||||| |||||| |
Sbjct 51329 TTAGCAGGTAAACAATCCAAGGCTTGGTGAATTCTGCTTCATGGTGATAGGGAGAGCCTA 51270
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||| |||||||||||||| | || ||||| ||| |||||||||||||||||| ||||||
Sbjct 51269 AATCAAAGGATCAAAAAGCGA-GTTGCTATAAACACTTGGCTGCCACAAGCCAATTATCC 51211
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||| |||||| || | ||| |||| | ||||||| | |
Sbjct 51210 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAGGGTCAGAAGGATCATGAAG 51151
Query 271 CCACACTTTCATGGTTTGTAT 291
| |||||||||| | |||
Sbjct 51150 CTGTGCTTTCATGGTCTTTAT 51130
>seq643
Length=2109413
Score = 183 bits (202), Expect = 5e-44
Identities = 164/205 (80%), Gaps = 3/205 (1%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
||||||| ||||||||||||| || ||||| ||||||| ||| ||| | ||||||||
Sbjct 1831828 ATCAGTAAAGTAAAACTAACCTATCCCATGATGGTCTAATCCCGACTCTCCCTCCCTATT 1831769
Query 93 AGTGGGTGAACAAT---CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
| || |||| ||| |||| |||| ||||||| |||| ||||||||||||| |
Sbjct 1831768 AATGAATGAATAATTCACCAATGCTTGGTGAATTCTACTTCACAATGATAGGAAGAGACA 1831709
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
| || |||||||| |||||||| | | |||||||| ||||| ||||||||||||||||
Sbjct 1831708 ATTTCAAAGGATCATAAAGCAACATTGTTATGAACGTTTGGCCACCACAAGCCAGTTATC 1831649
Query 210 CCTGTGGTAACTTTTCTGGCACCTC 234
| |||||||||| ||||| ||||||
Sbjct 1831648 CTTGTGGTAACTCTTCTGACACCTC 1831624
>seq724
Length=2122872
Score = 82.4 bits (90), Expect = 1e-13
Identities = 77/96 (80%), Gaps = 3/96 (3%)
Strand=Plus/Minus
Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94
|||| ||||| | ||||| ||||||| |||| ||||||||||||||||||| | ||
Sbjct 1637837 CAGTGGGGTACAGCTAACTTGTCTCACAGTGGTCCAAACCCAGCTCACGTTCCC--TGAG 1637780
Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130
||| |||||| |||||| || ||||||||||||
Sbjct 1637779 -GGGGGAACAACCCAACGTTTGGTGAATTCTGCTTC 1637745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854387363424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |