Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq653 242 6e-62 seq643 183 5e-44 seq724 82.4 1e-13 >seq653 Length=2310022 Score = 242 bits (268), Expect = 6e-62 Identities = 211/261 (81%), Gaps = 1/261 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| | | |||||| | ||||||||||||||| Sbjct 51389 TCATCAGTAGGGTAAAACTAACCTGTCTCACCAGGATCTAAATCTAGCTCACGTTCCCTA 51330 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||| |||||||||| |||| |||||||||||| ||||||| |||||| | Sbjct 51329 TTAGCAGGTAAACAATCCAAGGCTTGGTGAATTCTGCTTCATGGTGATAGGGAGAGCCTA 51270 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| |||||||||||||| | || ||||| ||| |||||||||||||||||| |||||| Sbjct 51269 AATCAAAGGATCAAAAAGCGA-GTTGCTATAAACACTTGGCTGCCACAAGCCAATTATCC 51211 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| |||| | ||||||| | | Sbjct 51210 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAGGGTCAGAAGGATCATGAAG 51151 Query 271 CCACACTTTCATGGTTTGTAT 291 | |||||||||| | ||| Sbjct 51150 CTGTGCTTTCATGGTCTTTAT 51130 >seq643 Length=2109413 Score = 183 bits (202), Expect = 5e-44 Identities = 164/205 (80%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||| ||||||||||||| || ||||| ||||||| ||| ||| | |||||||| Sbjct 1831828 ATCAGTAAAGTAAAACTAACCTATCCCATGATGGTCTAATCCCGACTCTCCCTCCCTATT 1831769 Query 93 AGTGGGTGAACAAT---CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | || |||| ||| |||| |||| ||||||| |||| ||||||||||||| | Sbjct 1831768 AATGAATGAATAATTCACCAATGCTTGGTGAATTCTACTTCACAATGATAGGAAGAGACA 1831709 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 | || |||||||| |||||||| | | |||||||| ||||| |||||||||||||||| Sbjct 1831708 ATTTCAAAGGATCATAAAGCAACATTGTTATGAACGTTTGGCCACCACAAGCCAGTTATC 1831649 Query 210 CCTGTGGTAACTTTTCTGGCACCTC 234 | |||||||||| ||||| |||||| Sbjct 1831648 CTTGTGGTAACTCTTCTGACACCTC 1831624 >seq724 Length=2122872 Score = 82.4 bits (90), Expect = 1e-13 Identities = 77/96 (80%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||| ||||| | ||||| ||||||| |||| ||||||||||||||||||| | || Sbjct 1637837 CAGTGGGGTACAGCTAACTTGTCTCACAGTGGTCCAAACCCAGCTCACGTTCCC--TGAG 1637780 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||| |||||| |||||| || |||||||||||| Sbjct 1637779 -GGGGGAACAACCCAACGTTTGGTGAATTCTGCTTC 1637745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854387363424