Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq500 109 1e-21 seq704 89.7 1e-15 >seq500 Length=9076171 Score = 109 bits (120), Expect = 1e-21 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183 |||||||||||||||||||||| |||| ||| || |||||||| | | || | | Sbjct 1120870 GTCTGTGATGCCCTTAGATGTTGGGGGCTACACACGTACTACACTGCCTGGCTCAGCATG 1120811 Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243 | | | ||| |||| |||| ||||| | | || | | || || ||||||| Sbjct 1120810 TGCCTACCCTACACCGGCAGGTGCAGGTAACCCGTTGAACCCCACTCATGATGGGGATCA 1120751 Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGC 303 | |||||| ||||| | | | ||| |||||| || ||||||||| ||||| | | | Sbjct 1120750 GGGATTGCAGTTATTCCCCATGAACAAGGAATTCCCAGTAAGCGCAGGTCATAAACTTGT 1120691 Query 304 GTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| | |||||||||||||| Sbjct 1120690 GTTGATTAAGCCCCTGCCCTTTGTA 1120666 >seq704 Length=970608 Score = 89.7 bits (98), Expect = 1e-15 Identities = 154/217 (71%), Gaps = 9/217 (4%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTACACTGACA 172 |||| | ||||| |||| ||||||||||| |||||| | |||| | |||||| |||| Sbjct 940599 GCAACAGCAGGTTGGTGACGCCCTTAGATG-TCTGGGACTGCACATGTGCTACAGTGACT 940657 Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCG 231 | || | | | || ||| ||| || || | | ||||| | ||| ||| ||| | | Sbjct 940658 GGTCCCGCATGCACCTCCCCTCGGCTGGCAGATGT-GGTAA-CCTGTCGAACCCTGTTGG 940715 Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 | ||||||| | | ||||||||| || | | | | ||||||| || | ||| || ||| Sbjct 940716 GGATGGGGATTGGGGATTGCAATTTTTCCCCGTGAGTGAGGAATTCCCAATAAACGTGTG 940775 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || | ||| || |||| ||||||||| |||||| Sbjct 940776 TCGTAAGCTAGC----ATTAAGTCCCTGCCATTTGTA 940808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947185990912