Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq704 100 9e-19
seq960 89.7 2e-15
seq611 87.8 5e-15
>seq704
Length=970608
Score = 100 bits (110), Expect = 9e-19
Identities = 116/152 (76%), Gaps = 12/152 (8%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
||||| |||||||||||| || ||||| ||||||| | || || |||||||||
Sbjct 939608 ACTCACTCCAATTACAAGGCCTGGAAAGAATCCTGTATTACC-TTCAT---CACTACCTC 939553
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
||| ||| || ||||||| | | ||||||| ||| |||||||||||| | |||
Sbjct 939552 CCCAGGTCAGG------TAATTTGTGTAC-TGCTGCCCTCCCTGGATGTGGTAGTCATTT 939500
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153
||||||||||||||| ||| || |||||| ||
Sbjct 939499 CTCAGGCTCCCTCTCTGGACTCAAACCCTGAT 939468
>seq960
Length=285498
Score = 89.7 bits (98), Expect = 2e-15
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA 141
|||| | |||||||||||||| |||| ||||||||| ||||||||||||||| |||||||
Sbjct 84850 TTTGGGTGCCTGCTGCCTTCCCTGGACGTGGTAGCCCTTTCTCAGGCTCCCTTTCCGGAA 84791
Query 142 TCGAACCCTAATTCCCC 158
|| |||| ||| |||
Sbjct 84790 CCGTACCCAGATTTCCC 84774
>seq611
Length=4753132
Score = 87.8 bits (96), Expect = 5e-15
Identities = 81/103 (79%), Gaps = 5/103 (5%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA-----GGTACTATCAAA 398
||||||||||| |||||||||| || ||||| || |||| | || || | ||||
Sbjct 842153 GCATGTATTAGTTCTAGAATTATCATAGTTATTCAAGTAGGAGAGGAGGGAACAACCAAA 842212
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441
||| |||||||||||||||||||||| | ||||| ||||||
Sbjct 842213 GGAACCATAACTGATTTAATGAGCCATTTGTAGTTTTACTGTA 842255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510377661184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |