Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq704 100 9e-19 seq960 89.7 2e-15 seq611 87.8 5e-15 >seq704 Length=970608 Score = 100 bits (110), Expect = 9e-19 Identities = 116/152 (76%), Gaps = 12/152 (8%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||| |||||||||||| || ||||| ||||||| | || || ||||||||| Sbjct 939608 ACTCACTCCAATTACAAGGCCTGGAAAGAATCCTGTATTACC-TTCAT---CACTACCTC 939553 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 ||| ||| || ||||||| | | ||||||| ||| |||||||||||| | ||| Sbjct 939552 CCCAGGTCAGG------TAATTTGTGTAC-TGCTGCCCTCCCTGGATGTGGTAGTCATTT 939500 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 ||||||||||||||| ||| || |||||| || Sbjct 939499 CTCAGGCTCCCTCTCTGGACTCAAACCCTGAT 939468 >seq960 Length=285498 Score = 89.7 bits (98), Expect = 2e-15 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAA 141 |||| | |||||||||||||| |||| ||||||||| ||||||||||||||| ||||||| Sbjct 84850 TTTGGGTGCCTGCTGCCTTCCCTGGACGTGGTAGCCCTTTCTCAGGCTCCCTTTCCGGAA 84791 Query 142 TCGAACCCTAATTCCCC 158 || |||| ||| ||| Sbjct 84790 CCGTACCCAGATTTCCC 84774 >seq611 Length=4753132 Score = 87.8 bits (96), Expect = 5e-15 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA-----GGTACTATCAAA 398 ||||||||||| |||||||||| || ||||| || |||| | || || | |||| Sbjct 842153 GCATGTATTAGTTCTAGAATTATCATAGTTATTCAAGTAGGAGAGGAGGGAACAACCAAA 842212 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 ||| |||||||||||||||||||||| | ||||| |||||| Sbjct 842213 GGAACCATAACTGATTTAATGAGCCATTTGTAGTTTTACTGTA 842255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510377661184