Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq722 111 1e-19
seq485 98.7 8e-16
seq1344 82.4 6e-11
>seq722
Length=1584642
Score = 111 bits (122), Expect = 1e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| |||||||| || ||||| || | |||| ||||| ||
Sbjct 1264902 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATTTTTCCCAGGTTCTGCTG 1264961
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| |||| ||| ||||| | ||||||||| || || ||||| ||
Sbjct 1264962 GTTGCTCTTCCGATTACATGAATCTTTGTAGAACATGTACGGGGTACCTGTCTCTGTCTG 1265021
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 1265022 AGACTCAATGATGGCATACCAAAG 1265045
>seq485
Length=11789088
Score = 98.7 bits (108), Expect = 8e-16
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
|||||||| || || | ||||| || |||||||| ||||| || ||| ||| ||||||
Sbjct 151753 CAGGAGGTTCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 151694
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || || ||||||||||| ||
Sbjct 151693 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACGTACATCAGAGA 151647
>seq1344
Length=6361600
Score = 82.4 bits (90), Expect = 6e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
|||| || || | | ||| || |||||||| || || | || || |||||||| | |
Sbjct 6040212 ATGAGCCACTGCTCCGAGAAAACCCTCGTCGCTTTGTCATCTTTCCTATCGAGTACCATG 6040271
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139
||||||||| ||||| || || ||||| |||||||||||||| | || |||||
Sbjct 6040272 ATATTTGGCAGATGTATAAGAAAGCGGAGGCTTCCTTCTGGACAGCCGAAGAGGT 6040326
Score = 82.4 bits (90), Expect = 6e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347
|| || || ||||||||||||||||| ||||||||||| || |||| || ||||||||
Sbjct 6041347 GAAGCCCGCTGTTTCTACGGCTTCCAAATTGCCATGGAAAACATCCATTCTGAGATGTAT 6041406
Query 61348 AGTGTTCTCATCGATACGTACAT 61370
||| | ||||| || || |||||
Sbjct 6041407 AGTCTCCTCATTGACACTTACAT 6041429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397560833712560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |