Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= AAMG01000056.1
Length=332
Score E
Sequences producing significant alignments: (Bits) Value
seq7320 82.4 1e-13
>seq7320
Length=4144
Score = 82.4 bits (90), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 7/229 (3%)
Strand=Plus/Minus
Query 105 GGATTTGCCTGCGGAAATCAACGTCTACACTCTTTAACCGGCTATTCCGTCAGCCGGCGG 164
|||||||||| ||| || |||||||| ||| |||||| ||| || ||||| |
Sbjct 3246 GGATTTGCCTAAAGAA-TCT--GTCTACACGCTTGAACCGGGACATCCAACACCCGGCTG 3190
Query 165 CGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAACGGAATACTAACC-GTT 223
| | || || ||||||||| || | | | | ||| |||||| ||||| |||
Sbjct 3189 ACCTAAC-CTTCTCCGTCCCCACATCGCATTGTATAGAGGTACAGGAATATTAACCTGTT 3131
Query 224 TCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATTA 283
|| ||||| | ||| || || |||||| | |||||| |||||| ||||| |
Sbjct 3130 TC--CCATCAGCTACGCATCTCTGCCTCACCTTAGGGGCCGACTCACCCTGCGCCGATGA 3073
Query 284 GCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCACCCCC 332
|| || ||||||||||| | ||||||||||||| | || ||| |||
Sbjct 3072 ACGTTGCGCAGGAAACCTTGGGCTTTCGGCGAGGGAGCTTTTCACTCCC 3024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 959855433600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |