Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 4e-14 >seq1 Length=7560343 Score = 82.4 bits (90), Expect = 4e-14 Identities = 91/120 (76%), Gaps = 6/120 (5%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA---AATGATAACATCG 57 |||||||||||||||| |||| || ||| |||| ||| |||| ||| || || || Sbjct 2926532 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCTGGCGGGTCATGGGAATTATGCCACCG 2926473 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| | ||| ||||| ||||| ||| ||||| | ||||||||||||||||||| Sbjct 2926472 C---ATCGCCAGTTGGCATCGTTTATGGTCGGAACTACAATGGTATCTGATCGTCTTCGA 2926416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278360696010