Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 5e-19
>seq1
Length=7560343
Score = 100 bits (110), Expect = 5e-19
Identities = 131/179 (73%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199
||||||||| | || ||||||||||||||| | | || | | |||||||| |||||
Sbjct 2926238 GAATAGGACC-GTGGCCCTATTTTGTTGGTTTTTGGAACTGAGGCCATGATTAAGAGGGA 2926296
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
| | | |||| | ||||| | |||||||||||||||||| | |||||
Sbjct 2926297 TGGCCAGGGGCATTCGTATTGCACCACTAGAGGTGAAATTCTTGGACCAGTGCAAGACGG 2926356
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| | ||||||| || ||||| |||||||||||||||| |||||||||| || ||
Sbjct 2926357 ACCAGAGCGAAAGGATTGGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTCAGAGG 2926414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915062180032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |