Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= AAMG01000345.1
Length=193
Score E
Sequences producing significant alignments: (Bits) Value
seq7320 123 3e-26
>seq7320
Length=4144
Score = 123 bits (136), Expect = 3e-26
Identities = 139/180 (77%), Gaps = 7/180 (4%)
Strand=Plus/Minus
Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64
||||||||||| ||||||||||||||||||| ||||| |||| ||||||| |||
Sbjct 3334 CTGAAGCTTAGTGGCTTTTCTTGGAAGCATGGTATCAATCACT---TCATCTACAAGTAG 3278
Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATC-CCGGATTTACCT-AAGATTCCAGCCTACCA 122
|||||| |||| | || | | | || || |||||||| ||| |||| | | | ||||
Sbjct 3277 ACTCGTTATCA-CGCCTTGACATTGACTCTCCGGATTTGCCTAAAGAAT-CTGTCTACAC 3220
Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATT 182
||| ||| ||||| ||||| || |||| |||| ||||||||||||| |||||||||
Sbjct 3219 GCTTGAACCGGGACATCCAACACCCGGCTGACCTAACCTTCTCCGTCCCCACATCGCATT 3160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518324373702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |