Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq9951 141 4e-32
seq14225 136 2e-30
seq4448 136 2e-30
>seq9951
Length=459
Score = 141 bits (156), Expect = 4e-32
Identities = 90/98 (92%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 221 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCGAGTGAACAGGGAAGAGCCCAATG 280
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGG 98
| ||||||| |||||| ||||||| |||| ||||||||
Sbjct 281 CTGAATCCCTGCCCCGTGGTGGGGTGCGGTACATGTGG 318
>seq14225
Length=1584
Score = 136 bits (150), Expect = 2e-30
Identities = 89/98 (91%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
Sbjct 1093 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCGAGCGAACAGGGAAGAGCCCAATG 1152
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGG 98
| ||| ||| |||||||||||||| |||| ||||||||
Sbjct 1153 CTGAAACCCTGCCCCGCGGTGGGGTGCGGTACATGTGG 1190
>seq4448
Length=753
Score = 136 bits (150), Expect = 2e-30
Identities = 89/98 (91%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 374 GGAAAATAAACTAACCAGGATTCCCTCAGTAATGGCGAGTGAACAGGGAAGAGCCCAATG 315
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGG 98
| ||||||| |||||| ||||||| |||| ||||||||
Sbjct 314 CTGAATCCCTGCCCCGTGGTGGGGTGCGGTACATGTGG 277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230367472560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |