Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq7320 347 4e-93 seq6993 342 2e-91 seq11968 340 7e-91 seq9910 315 3e-83 seq8424 300 6e-79 seq5225 298 2e-78 seq8549 282 2e-73 seq10654 196 2e-47 >seq7320 Length=4144 Score = 347 bits (384), Expect = 4e-93 Identities = 415/550 (75%), Gaps = 25/550 (5%) Strand=Plus/Minus Query 46 ACTTCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAG--CTTGTGGGCCCCCTAGACCA 102 ||||| | | |||||||||||| || ||| |||||| ||| || |||||||| ||| Sbjct 2680 ACTTCTCAGTATTCGGAGTTTGCAATGGTTT-GGTAAGTTCTTATGAACCCCCTAG-CCA 2623 Query 103 TC-CAGTGCTCTACCTCCGGGAAG-AAACACGCGACGCTGCACCTAAATGCATTTCGGGG 160 | |||||||||||| ||| || ||| ||| | | || |||||||| |||||| | Sbjct 2622 TAACAGTGCTCTACCCCCGAGAGTTAAATACGAGGCACT--ACCTAAATAGTTTTCGGAG 2565 Query 161 AGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCA 220 |||||||||||| | ||||||| || ||||||||||||||||||||| |||||||| | Sbjct 2564 AGAACCAGCTATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCCCAAA 2505 Query 221 GTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCA 280 |||||||| | |||||||||| |||||| | |||| ||||| |||| ||| Sbjct 2504 TTTTTCAACATTTGTGGGTTCGGACCTCCAGTACCTGTTACGGCACCTTCATCCTGGCCA 2445 Query 281 TGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCG 340 |||||||||||||| | ||||||||| | | || ||| | |||||||||||||||||| Sbjct 2444 TGGATAGATCACTTGGTTTCGGGTCTACACCCAGCAACT-AGACGCCCTATTCGGACTCG 2386 Query 341 CTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTC 400 ||||||||||| || ||| | |||||| || || || || | || |||| | | | Sbjct 2385 CTTTCGCTACGCCT--CCCCTATCGGTTAAGCTTGCTACTGAATG-TAAGTCGCTGACCC 2329 Query 401 ATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTG 460 ||| | ||||||| |||| |||||| ||| || ||||| || | ||| Sbjct 2328 ATTATACAAAAGGTACGCAGTCACC-----CCT----TGC---GAGGCTCCCACTGTTTG 2281 Query 461 TAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCT 520 || ||| | ||||||||| |||||||||||||| || ||||| |||||| ||||||||| Sbjct 2280 TATGCATACGGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCT 2221 Query 521 CACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCC 580 ||||||||| || | ||||||||| | |||||||||| ||| || ||||||| || Sbjct 2220 CACGGTACTGGTTCACTATCGGTCGATTACGAGTATTTAGCCTTGGAGGATGGTCCCCCC 2161 Query 581 AGATTCACAC 590 | |||| || Sbjct 2160 ATGTTCAGAC 2151 >seq6993 Length=5165 Score = 342 bits (378), Expect = 2e-91 Identities = 423/566 (75%), Gaps = 27/566 (5%) Strand=Plus/Minus Query 40 GCTCTCACTTCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAG-CTTGTGGGCCCCCTA 97 |||| |||| ||| |||||||||||| || ||| |||||| | | | ||||||| Sbjct 1619 GCTCGCACTCATCGGTATTCGGAGTTTGCAATGGTTT-GGTAAGTCGCGATGACCCCCTA 1561 Query 98 GACCATC-CAGTGCTCTACCTCCGG-GAAGAAACACGCGACGCTGCACCTAAATGCATTT 155 | |||| |||||||||||| ||| | || || | | | || |||||||| ||| Sbjct 1560 G-CCATAACAGTGCTCTACCCCCGATGGTGATACTTGAGGCACT--ACCTAAATAGTTTT 1504 Query 156 CGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCC 215 ||| ||||||||||||| | | |||| || ||||||||||||||||||||| |||||| Sbjct 1503 CGGAGAGAACCAGCTATTTCCAGATTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCC 1444 Query 216 CCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCT 275 ||| | |||||||| | |||||||||||||||||| || ||||| ||||||||| Sbjct 1443 CCTAACTTTTCAACGTTAGTGGGTTCGGTCCTCCAGTACGTGTTACCGCACCTTCAACCT 1384 Query 276 GCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGG 335 | |||||||||||||| | | ||||||||| | | || ||| | ||||||||||||| Sbjct 1383 GGCCATGGATAGATCATCTGGTTTCGGGTCTACACCCAGCGACTGA-ACGCCCTATTCGG 1325 Query 336 ACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCA 395 ||||| |||| ||||| || ||| | | |||||| | || || || | || |||| Sbjct 1324 ACTCGATTTCTCTACGCCTTCCCTATTC-GGTTAAGATTGCAACTGAATG-TAAGTCGCT 1267 Query 396 GGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTC--AGCTCCGA 453 | | |||| | ||||||| |||| |||||| ||| ||| ||||| | Sbjct 1266 GACCCATTATACAAAAGGTACGCAGTCACC-----CCT---------TTCGAGGCTCCTA 1221 Query 454 CGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACC 513 | | ||||| ||||| ||||||||| |||||||||||||| | ||||| |||||| || Sbjct 1220 CTGTTTGTATGCACACGGTTTCAGGATCTATTTCACTCCCCTTCCGGGGTTCTTTTCGCC 1161 Query 514 TTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGG 573 ||||||||||||||||||| | ||||||||| | |||||||||| ||| || ||| Sbjct 1160 TTTCCCTCACGGTACTTGTTCACTATCGGTCGATTACGAGTATTTAGCCTTGGAGGATGG 1101 Query 574 TCCCGCCAGATTCACACGAAATTTCA 599 |||| ||| |||| || |||||| Sbjct 1100 TCCCCCCATCTTCAGACAGGATTTCA 1075 >seq11968 Length=3642 Score = 340 bits (376), Expect = 7e-91 Identities = 439/595 (74%), Gaps = 26/595 (4%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| ||||| ||| | ||||| |||| | ||| | | | ||| | || ||||| Sbjct 2284 TCGACGACGGACGTTAG-CACCCGCCGTCTGTCTCCCGAG-TATTACTCCTGGGTATTCG 2227 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGCTCTACCTCC 119 |||||||||| || |||| | ||| || |||||||| ||||||||||||||||| || Sbjct 2226 GAGTTTGGTTAGGTTTGGTAGGTCTGTAGGACCCCCTAGCCCATCCAGTGCTCTACCCCC 2167 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 | | | | ||| || |||||||| ||||| ||||||||||||||| | || Sbjct 2166 CAGGGTATTCGCTCGAGGCACTACCTAAATAGTTTTCGCGGAGAACCAGCTATCTCCTAG 2107 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||| ||||||| |||||||| | ||| Sbjct 2106 TTTGATTGGCCTTTCACCCCTAACCACACGTCATCCGAGTCTTTTTCAACAGACACCGGT 2047 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||| |||||| ||| |||||| ||||| ||||| ||||| ||||||||| | || Sbjct 2046 TCGGCCCTCCAATGGGTGTTACCCCATCTTCAGCCTGCACATGGCTAGATCACTAGGTTT 1987 Query 300 CGGGTCTTGATCGTGCC--ACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACC 357 ||||||| | || | | ||| | | ||||||||| |||||||||||||| || || | Sbjct 1986 CGGGTCT--AACGCGACGAACTGA-ATGCCCTATTCAGACTCGCTTTCGCTGCGCCTTCG 1930 Query 358 CCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 || ||| |||| || || | |||| || |||| ||| ||| | ||||||| ||| Sbjct 1929 CCTATCGGCTTAAGCTTGC-TCGTCACGCTAAGTCGCTGGCCCATAATACAAAAGGTACG 1871 Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477 |||||| ||| ||| || || | | ||||| || |||||||| Sbjct 1870 GCGTCAC------CCTTGCGGGC-CT-------CGCCTGTTTGTAAGCGTCCGGTTTCAG 1825 Query 478 GTACTATTTCACTCCCC--GCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCG 535 | ||||||||||||||| | | ||||| |||||||||||||||||||||||||||| || Sbjct 1824 GAACTATTTCACTCCCCTTGTC-GGGGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCG 1766 Query 536 CTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 ||||||||||| ||||||| |||||||| |||||||||| ||| |||| || Sbjct 1765 CTATCGGTCACTGAGGAGTACTTAGGCTTGGAGGGTGGTCCCCCCACGTTCAGAC 1711 >seq9910 Length=308115 Score = 315 bits (348), Expect = 3e-83 Identities = 400/541 (74%), Gaps = 21/541 (4%) Strand=Plus/Plus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGC 110 ||| |||||||||||| | || |||||| | | |||||||| | | |||||| Sbjct 258225 CGGTATTCGGAGTTTGCATAGGTTTGGTAAGTCGCCATGACCCCCTAGCCTAAACAGTGC 258284 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| ||| | | || || || || |||||||| |||||| ||||||||||| Sbjct 258285 TCTACCCCCGC-AGGTAATACTTGAGGCACTACCTAAATAGTTTTCGGAGAGAACCAGCT 258343 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT-CAAC 229 || | ||||||| || ||||||||||||||||||||| |||||| || |||||| |||| Sbjct 258344 ATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCGCT-AGTTTTGCAAC 258402 Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289 ||| ||||||| |||||| | |||| ||||| |||| |||||||||||| Sbjct 258403 ACTAGTCGGTTCGGACCTCCAGTACCTGTTACGGCACCTTCATCCTGGCCATGGATAGAT 258462 Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349 ||||| | ||||||||| | | || ||| |||||||||||||||||| |||| ||| Sbjct 258463 CACTTGGTTTCGGGTCTACACCCAGCGACT-GGACGCCCTATTCGGACTCGATTTCTCTA 258521 Query 350 CGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAA 409 ||||| ||| | | ||||||||| || || || | || |||| | | |||| | ||| Sbjct 258522 CGGCTCCCCTATTC-GGTTAACCTTGCCACTGAATG-TAAGTCGCTGACCCATTATACAA 258579 Query 410 AAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACAT 469 |||| |||| ||||| ||| || ||||| || ||||| ||| Sbjct 258580 AAGGTACGCAGTCAC------CCT----TGC----GGGCTCCTACTTTTTGTAAGCATGC 258625 Query 470 GGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACT 529 ||||||||| |||||||||||||| || ||||| |||||| |||||||||||||||||| Sbjct 258626 GGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACT 258685 Query 530 TGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 || | ||||||||| | |||||||||| ||| || ||||||| ||| ||||| | Sbjct 258686 GGTTCACTATCGGTCGATGATGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGA 258745 Query 590 C 590 | Sbjct 258746 C 258746 >seq8424 Length=263062 Score = 300 bits (332), Expect = 6e-79 Identities = 435/602 (72%), Gaps = 23/602 (4%) Strand=Plus/Plus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||| ||||| |||| | ||||| |||| | |||| || ||| || ||||||| Sbjct 260870 GACGACGGACCTTAG-CACCCGCCGTCTGTCTGCCGAACTAG-ACTCGTTGGTATTCGGA 260927 Query 63 GTTTGGTT-GATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120 |||||||| || || |||| | || | | |||| | ||||||||||||||||| || Sbjct 260928 GTTTGGTTAGAATT-GGTAGATCTCGCGACCCCCGCAT-CCATCCAGTGCTCTACCCCCA 260985 Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180 ||| | ||||||| |||| ||| |||||| |||||||||||||| | | Sbjct 260986 ACGGCAAATATTCGACGCTCTACCTCAATAGATTTCGCGGAGAACCAGCTATTTCCCGGC 261045 Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240 ||||||||||||||||||||| |||| |||||| | |||||||| | |||| Sbjct 261046 TTGATTGGCCTTTCACCCCTAAGCACAACTCATCCGACAATTTTTCAACATTGAACGGTT 261105 Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300 |||||||||| || ||||| |||||||||| |||| ||||||| | | ||| Sbjct 261106 CGGTCCTCCAGTGCGTGTTACCGCACCTTCAACCTGGTCATGCATAGATCGCCGGGTTTC 261165 Query 301 GGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCA 360 |||||| | | ||| |||||||||| |||||||||||||| || |||| || Sbjct 261166 GGGTCTAATGCATCAAACTATGGCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCT 261225 Query 361 CACGGGTTAACCTCGC--GACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGC 418 |||| |||| || || || ||| | || || ||| | |||| | ||| ||| |||| Sbjct 261226 AACGGCTTAAGCTTGCTTGATACA---CTAAGTCACAGACCCATTATGCAAGAGGTACGC 261282 Query 419 CGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGG 478 |||| ||| || || | | |||| || | ||||||||| ||||||||| Sbjct 261283 GGTCA---GGT--CTCAAGGAC------CCTCCCACTGCTTGTAGGCATCCGGTTTCAGG 261331 Query 479 TACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 |||| ||||||||||| | ||||| ||||||||||||||||||||||||| || | || Sbjct 261332 TACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACT 261391 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597 |||||||| | |||||||||||||| |||||||||| ||| |||| || | ||| Sbjct 261392 ATCGGTCATGTACGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGACAGAGTTT 261451 Query 598 CA 599 || Sbjct 261452 CA 261453 >seq5225 Length=798 Score = 298 bits (330), Expect = 2e-78 Identities = 385/522 (74%), Gaps = 32/522 (6%) Strand=Plus/Minus Query 91 CCCCCTAGACCATC-CAGTGCTCTACCTCCGG-GAAGAAACACGCGACGCTGCACCTAAA 148 ||||| | ||||| |||||||||||| ||| | || ||||| | | || ||||||| Sbjct 693 CCCCCCA-ACCATGACAGTGCTCTACCCCCGAAGGTGAGACACGAGGCACT--ACCTAAA 637 Query 149 TGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAG 208 | |||||| ||||||||||||| | ||||||| || ||||||||||||||||||||| Sbjct 636 TAGTTTTCGGAGAGAACCAGCTATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAG 577 Query 209 GTCATCCCCTCAGTTTT-CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGC 267 |||||| || |||||| |||| ||| ||||||| |||||| | |||| | Sbjct 576 CTCATCCGCT-AGTTTTGCAACACTAGTCGGTTCGGACCTCCAGTACCTGTTACGGCACC 518 Query 268 TTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCC 327 |||| |||| ||||||||||||||||| | ||||||||| | | || ||| ||||| Sbjct 517 TTCATCCTGGCCATGGATAGATCACTTGGTTTCGGGTCTACACCCAGCGACTGG-ACGCC 459 Query 328 CTATTCGGACTCGCT----------TTCGCTACGGCTACCCCACACGGGTTAACCTCGCG 377 ||||||||||||| | ||| ||||| || ||| | ||| |||| || || Sbjct 458 CTATTCGGACTCGTTCGGACTCGTTTTCTCTACGCCTTCCCTATTCGG-TTAAGCTTGCC 400 Query 378 ACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAA 437 || || | || |||| | | |||| | ||||||| ||||||||||| | | || | Sbjct 399 ACTGAATGTAAG-TCGCTGACCCATTATACAAAAGGTACGCCGTCACCCGTTTCC----A 345 Query 438 GGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCC 497 ||| |||||| | ||||| ||| ||||||||| |||||||||||||| || Sbjct 344 GGC--------TCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTCC 293 Query 498 AGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATT 557 ||||| |||||| |||||||||||||||||| || | ||||||||| | ||||||| Sbjct 292 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATTACGAGTATT 233 Query 558 TAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 ||| ||| || ||||||| ||| |||| || |||||| Sbjct 232 TAGCCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTCA 191 >seq8549 Length=2370 Score = 282 bits (312), Expect = 2e-73 Identities = 430/602 (71%), Gaps = 23/602 (4%) Strand=Plus/Plus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||| ||||| |||| | ||||| |||| | |||| || ||| || ||||||| Sbjct 626 GACGACGGACCTTAG-CACCCGCCGTCTGTCTGCCGAACTAG-ACTCGTTGGTATTCGGA 683 Query 63 GTTTGGTT-GATTTCGGTA-AGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120 |||||||| || || |||| | || | | |||| | ||||||||||||||||| || Sbjct 684 GTTTGGTTAGAGTT-GGTAGATCTCGCGACCCCCGCAT-CCATCCAGTGCTCTACCCCCT 741 Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180 | | | ||| || |||| ||| ||||| |||||||||||||| | | Sbjct 742 AGGGTGTCCGCTCGAGGCACTACCTCAATAGTTTTCGCGGAGAACCAGCTATTTCCCGGC 801 Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240 ||||||||||||||||||||| |||| |||||| | | |||||||| | | | |||| Sbjct 802 TTGATTGGCCTTTCACCCCTAAACACAACTCATCCGGTAACTTTTCAACGTTAATCGGTT 861 Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300 ||| |||||| || ||||| ||||| |||| |||| |||||| | | ||| Sbjct 862 CGGACCTCCAGTGCGTGTTACCGCACCTTCATCCTGGTCATGCCTAGATCGCCGGGTTTC 921 Query 301 GGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCA 360 |||||| | | ||| | |||||||||| |||||||||||||| || |||| || Sbjct 922 GGGTCTAATACATCAAACTAAGTCGCCCTATTCAGACTCGCTTTCGCTGCGCCTACACCT 981 Query 361 CACGGGTTAACCTCGC--GACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGC 418 ||| |||| || || || ||| || || ||| | |||| | ||| ||| |||| Sbjct 982 ATCGGCTTAAGCTTGCTTGATACA---TTAAGTCACAGACCCATTATGCAAGAGGTACGC 1038 Query 419 CGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGG 478 ||||| | | || || |||||| || | ||||||||| |||||||| Sbjct 1039 AGTCAC----TCCACAAGAG-------AGCTCCTACTGCTTGTAGGCAATCCGTTTCAGG 1087 Query 479 TACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 |||| ||||||||||| | ||||| ||||||||||||||||||||||||| || |||| Sbjct 1088 TACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCGCT 1147 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597 |||||||| | |||||||||||||| |||||||||| ||| |||| || |||| Sbjct 1148 ATCGGTCATGTACGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGACAGAATTA 1207 Query 598 CA 599 || Sbjct 1208 CA 1209 >seq10654 Length=1634 Score = 196 bits (216), Expect = 2e-47 Identities = 246/330 (75%), Gaps = 6/330 (2%) Strand=Plus/Minus Query 52 CGGCATTCGGAGTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGC 110 ||| |||||||||||| | || |||||| | | |||||||| | | |||||| Sbjct 340 CGGTATTCGGAGTTTGCATAGGTTTGGTAAGTCGCCATGACCCCCTAGCCTAAACAGTGC 281 Query 111 TCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCT 170 |||||| ||| | | || || || || |||||||| |||||| ||||||||||| Sbjct 280 TCTACCCCCGC-AGGTAATACTTGAGGCACTACCTAAATAGTTTTCGGAGAGAACCAGCT 222 Query 171 ATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT-CAAC 229 || | ||||||| || ||||||||||||||||||||| |||||| || |||||| |||| Sbjct 221 ATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCGCT-AGTTTTGCAAC 163 Query 230 CTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGAT 289 ||| ||||||| |||||| | |||| ||||| |||| |||||||||||| Sbjct 162 ACTAGTCGGTTCGGACCTCCAGTACCTGTTACGGCACCTTCATCCTGGCCATGGATAGAT 103 Query 290 CACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349 ||||| | ||||||||| | | || ||| | ||||||||||||||||| |||| || Sbjct 102 CACTTGGTTTCGGGTCTACACCCAGCGACT-AGTCGCCCTATTCGGACTCGATTTCTCTT 44 Query 350 CGGCTACCCCACACGGGTTAACCTCGCGAC 379 || || ||| | | |||||| || || || Sbjct 43 CGCCTCCCCTATTC-GGTTAAGCTTGCCAC 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817326287616