Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= AAMG01001286.1
Length=411
Score E
Sequences producing significant alignments: (Bits) Value
seq10398 125 2e-26
>seq10398
Length=50767
Score = 125 bits (138), Expect = 2e-26
Identities = 205/293 (70%), Gaps = 2/293 (1%)
Strand=Plus/Minus
Query 88 ACCAGGATGTCTTCCATGATCAGGTATTGCAGGTCGGAGCCAAAGAACATGTCCAGCGCG 147
|||| || ||||||| |||| |||| || || | || ||||||| | || ||
Sbjct 25294 ACCAAAATATCTTCCAACATCAAATATTCCAAATCACATCCGTAGAACATATTCAAGGCA 25235
Query 148 TCTTTCGGCGAGCAGATCATCGCTTCGCCACGGCGGTTGAGCGAGGTGTTCAGGGACACG 207
|| |||| || ||||||| || ||||||||||| ||||| || ||||| |||
Sbjct 25234 TCGGTCGGGCTACAAATCATCGGCTCACCACGGCGGTTAAGCGATGTATTCAGCACCACA 25175
Query 208 CCGTTGCCG-GTCAGCACTTCCAGCTCTTTCATCATGTCGTAGTAGCGCGGGTTGTATTC 266
| |||||| || || ||| | | | || | || ||||| |||||||| ||
Sbjct 25174 GCATTGCCGCGTAAGGT-TTCTAAATGCTCAATGAGCTCATAGTAACGCGGGTTAGTCTC 25116
Query 267 GCGCTTGAGCACCTGGGCGCGGGAGGTGCCATCTTCATGGACCACTTCCGGCACGCGGGT 326
|| ||| ||| || || || | |||||||||||||| ||||||||||| | || |
Sbjct 25115 ACGTGTGACCACTTGCGCACGCGCAGTGCCATCTTCATGCACCACTTCCGGGATACGTGA 25056
Query 327 CTTCCACTCTTCCGACACTTCAAAGGTGAAGGTCATGAACGGCGCCGGGTGAT 379
||||| | || | ||| |||||||| |||||||| |||| ||||| ||||
Sbjct 25055 TTTCCAGTGCTCGGCCACATCAAAGGTAAAGGTCATATACGGTGCCGGATGAT 25003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1212617364448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |