Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= AAMG01001383.1
Length=561
Score E
Sequences producing significant alignments: (Bits) Value
seq13848 80.6 9e-13
>seq13848
Length=30995
Score = 80.6 bits (88), Expect = 9e-13
Identities = 158/230 (69%), Gaps = 9/230 (4%)
Strand=Plus/Plus
Query 91 GACGAAGTTCTGCTCCGTGAGGACGGCCATCTGACTTAGATAATTTAAGGACGCCTCACC 150
||||||||||||| |||| || |||||||||| |||| | | || | ||| ||
Sbjct 30168 GACGAAGTTCTGCACCGTCAGCCCGGCCATCTGCGACAGATGGCTCATGGTCTGCTCGCC 30227
Query 151 GCTGTTGTTCTGCCAGTTGGTATTGGTCATGAAACTGACGGCGGTATTAAACGCCTAGGT 210
|| || | |||||||||||| ||||| | ||| |||| ||||| || |||||| ||||
Sbjct 30228 GCCGTAGGACTGCCAGTTGGTGTTGGTGACGAAGCTGATCGCGGTGTTGAACGCC-AGGT 30286
Query 211 ----CCATTCCTGGCCCGGCAGGTTTTGCGGGTTCAGCGGGAGGGAGCCTTGAAATAACA 266
| | | |||| | | |||||||||||||| ||| | | || | ||
Sbjct 30287 GCGGCGACAGCGGGCC---GAAGCCCTGCGGGTTCAGCGGCAGGTGGTCCTGCAGGCGCA 30343
Query 267 GAATAGAGAACAGCAGCAGGAAGCCGGCGAGGTTGAATGCGAGCAAGGCC 316
| || | | ||||| | |||||||||| || || || ||| |||||
Sbjct 30344 GGATGCCGTAGAGCAGGAAGAAGCCGGCGGCGTCGACCGCCAGC-AGGCC 30392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1692545081248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |