Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= AAMG01001416.1 Length=341 Score E Sequences producing significant alignments: (Bits) Value seq11112 172 1e-40 >seq11112 Length=532 Score = 172 bits (190), Expect = 1e-40 Identities = 115/128 (90%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 101 GAAGGGTCGGCGAGGTTGCCCATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCG 160 || |||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct 138 GACGGGTCGGCCAGGTTGCCCATGACGTGGATCAGGCCCATTACCGCACCAATGATGCCG 79 Query 161 ATGGTCGGCGCGTAGCCGCCCATGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTT 220 ||||||||||| ||||| ||||||||||| || || |||||||| | |||||| |||||| Sbjct 78 ATGGTCGGCGCATAGCCACCCATGCTTTCGAACACCTTGGCGGCCTGGATATCACGGCTT 19 Query 221 TCCTGGGT 228 |||||||| Sbjct 18 TCCTGGGT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988651096608