Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq9825 84.2 4e-14 >seq9825 Length=26500 Score = 84.2 bits (92), Expect = 4e-14 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 80 GCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGAT 139 || ||||||||| |||||| | | ||| ||||| ||||| | |||| ||||| Sbjct 12770 GCTTCGGGCCGCACCTACCACGTCACGTTCAACCCGCCCAAGGTCGAAGGCCTGGACGGC 12829 Query 140 GTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGTCACCGC 199 ||||||||||| ||||| |||||| ||||||||| |||||||| || | ||| Sbjct 12830 GTGACCGGCGAGCCGCTGGTGCAGCGCGAGGACGACAAGGAAGAAACGGTCAAGAAGCGC 12889 Query 200 CTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCTACC 245 ||| || ||| || ||| ||||||||||||| ||||| Sbjct 12890 CTGGACGTCTACAGCAGCCAGACCCGCCCGCTGGTGGACTACTACC 12935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899064589472