Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq9883 104 2e-20 >seq9883 Length=63294 Score = 104 bits (114), Expect = 2e-20 Identities = 119/156 (76%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 |||||||||||| | || || | ||||||||| ||||| || |||||| | || || Sbjct 19010 TGCTGACCAACACCCCCGGCGTTTTGGACAAGGCAGGCAGCCTGCTGACCGACCTC-ACG 18952 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120 ||| | | |||| |||| |||| ||||||||||||| |||||||||||||| ||| Sbjct 18951 GCGCGCGAGATCGACGCCCTGTTCGCTGACGGCACCATCTCGGGCGGCATGCTGCCCAAG 18892 Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGG-CGGCGT 155 ||| | |||| ||||| || | ||||| |||||| Sbjct 18891 ATCAGCGGCGCCCTGGATGCCG-CCAAGGCCGGCGT 18857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534322039557