Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= AAMG01002051.1
Length=353
Score E
Sequences producing significant alignments: (Bits) Value
seq9800 122 2e-25
>seq9800
Length=25387
Score = 122 bits (134), Expect = 2e-25
Identities = 232/343 (68%), Gaps = 28/343 (8%)
Strand=Plus/Plus
Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60
|||||| |||||| ||||| ||||| |||||| |||| || | ||||| ||| | |
Sbjct 18777 CGACCGGCTGCGCTTCGTGGCCGAGCGTGCCGAGGTGGGCGAGGAGCGCGAGGCGCTTTT 18836
Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120
||||||||||| |||||| | | ||||||||||||| || ||||| | |||||||||
Sbjct 18837 TGCCGTGACCATCCCCGAGGAACGCGGCAGCTTCAAGCGCTTTTGCGAAGTCGTGGGCAA 18896
Query 121 ---------------GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGA 165
|||| | | ||||| ||||||||||| || | || | | |
Sbjct 18897 GCTGCCTGGCGGCCCGCGCAACGTGACCGAGTTCAACTACCGCATCACCCACGAGAACAA 18956
Query 166 GGCGCACATCTTTGTCGGCGTGCAGACCCACCCCGACACCGACCCCCGCAG--CGCGCTG 223
||| || |||| || ||| || ||| || || || | || || || | |
Sbjct 18957 GGCCCATGTCTTCGTGGGCCTG-------ACCACGGCAGCGCGCGGCG-AGTCCGAGAAG 19008
Query 224 ATCGCCAG---CCTGACCGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTG 280
|||||||| | | ||||||| ||| || ||||||||||||| | || ||
Sbjct 19009 ATCGCCAGGAACTTCGAGAAGCAGGGCTTCGAGGCGCTGGACCTGACCTTCGACGACATG 19068
Query 281 GCCAAGCTGCACATCCGCCATATGGTCGGCGGCCATGCGGCGC 323
|||||| ||| | ||||| ||||||||||| ||| || |||
Sbjct 19069 GCCAAGGAGCATCTGCGCCACATGGTCGGCGGTCATTCGCCGC 19111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027045313952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |