Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq8424 394 3e-107 seq6860 374 3e-101 seq11968 345 1e-92 seq9910 338 2e-90 seq6993 320 6e-85 seq7320 313 8e-83 seq10654 257 6e-66 seq12938 183 1e-43 >seq8424 Length=263062 Score = 394 bits (436), Expect = 3e-107 Identities = 426/565 (75%), Gaps = 21/565 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||||||||||| || ||| ||| || |||||| | |||| || Sbjct 259599 TCGACTTGTCAGTCTCGCAGTCAGGCAGGCTTATGCCATTGCACTCAGCGAACGATTTCC 259658 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| ||||| ||| | | ||||||||||||| ||| ||||| | |||||||||| Sbjct 259659 GACCGTTCTGAGCCCACCATCGCGCGCCTCCGTTACTCTTTAGGAGG-CGACCGCCCCAG 259717 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| || |||||| |||| ||| | ||||| ||||||| ||||| Sbjct 259718 TCAAACTACCCACCATACATTGTCCCGGACCCGGATAACGGGCCGCGGTTAGACATCCAT 259777 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 | || |||||||||||| | |||||| | || ||| || ||| || Sbjct 259778 AGTAATAAGGGTGGTATTTCAAGGGTGGCTCCACCAAGGCTGGCGCCCTGGCTTCAAAGC 259837 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 || |||||||||||||||| || | ||||||||||| |||||||||| ||||| | Sbjct 259838 CTACCACCTATCCTACACATGCCACTACGAATGCCAATGTAAAGCTATAGTAAAGGTGCA 259897 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| |||| ||| | ||||||| || | | | ||||||||| | Sbjct 259898 CGGGGTCTTTCCGTCTAACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 259957 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | || || | |||||||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct 259958 AGTCTATGCTGGAGACAGCGGGGAAGTCGTTACGCCATGCGTGCAGGTCGGAACTTACCC 260017 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 260018 GACAAGGAATTTCGCTACCTTAGGCCCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 260077 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 ||| || | | | ||| |||||||||||||||||||||| Sbjct 260078 GATT----------CAGAGCTTG---------CACCCCTCCTCTTAACCTTCCAGCACCG 260118 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||| || ||||| ||| Sbjct 260119 GGCAGGCGTCAGACCCTATACGTCG 260143 >seq6860 Length=6169 Score = 374 bits (414), Expect = 3e-101 Identities = 426/567 (75%), Gaps = 25/567 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||||||||| ||||||||||||| || ||| ||| ||| |||| || | | |||| | Sbjct 5790 TCGACTTGTTAGTCTCGCAGTCAGGCAGGCTTTTGCCATTATACTCGACGAAC-GATTTC 5732 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | ||| ||||| ||| | | |||||||||||| ||||||||| | ||||||||| Sbjct 5731 CGACCGTTCTGAGCCTACCATCGCACGCCTCCGTTACTCTTTGGGAGG-CGACCGCCCCA 5673 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA 179 || ||||| ||||||| || ||||||| || ||| | || | ||||||||||||| Sbjct 5672 GTCAAACTGCCCACCATGCGCTGTCCCGGCTCCCGATAAGGGAACGCGGTTAGATATCCA 5613 Query 180 CTACGGTCAGAGTGGTATTTCA-ACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 || | || ||||||||||| | ||||||||| || ||| || ||| | Sbjct 5612 TAACCATTAGGGTGGTATTTCACATTGCGACTCCACCCGAGCTGGCGCCCAGGCTTCAAA 5553 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 |||| |||||||| |||||||||| | ||||| ||| | | |||||| ||| ||||| Sbjct 5552 GTCTACCACCTATTCTACACAAACAGTCACGAATACCAGTGCAAAGCTACAGTAAAGGTG 5493 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||||| |||| |||| ||| | ||||||| || | | | ||||||||| Sbjct 5492 CACGGGGTCTTTCCGTCTGACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCAC 5433 Query 358 CGGGCCTGTGGTTG-AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTA 416 | | || || ||| |||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 5432 TGAGTCTATGTTTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTA 5373 Query 417 CCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGC 476 |||||||||||||||||||||||||||| ||||||||| | ||||||||||| ||||| Sbjct 5372 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTCCGGCCGCCGTTTACCGGGGC 5313 Query 477 TTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCA 536 ||||||| || | | | ||| ||||||||||||||| ||| Sbjct 5312 TTCAATT----------CAGAGCTTG---------CACTCCTCCTCTTAACCTTCCGGCA 5272 Query 537 CCGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||||| || ||||| || Sbjct 5271 CCGGGCAGGCGTCAGACCCTATACGTC 5245 >seq11968 Length=3642 Score = 345 bits (382), Expect = 1e-92 Identities = 415/567 (73%), Gaps = 38/567 (7%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||| |||| | ||| ||| ||| |||| | | ||||| || Sbjct 3559 TCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCTACGCGTGATTTCC 3500 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| |||||| | ||||| | | |||||||||| | ||||||||| Sbjct 3499 GACCACGCTGAGCGCACCTTCGTACTCCTCCGTTACTCC---------CCCCCGCCCCAG 3449 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCA- 179 | ||||| ||||||| |||||||||| | || ||| | || | ||||||| ||||| Sbjct 3448 TCAAACTGCCCACCATGCACTGTCCCGGATCCCGATGAAGGATCGCGGTTAGACATCCAT 3389 Query 180 --CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCAT 237 |||| || |||||||||||| | | |||||| | || ||| ||| ||| Sbjct 3388 ATCTACA---AGGGTGGTATTTCAAGGATGGCTCCACGAGAGCTGGCGCCCTCGCTTCAA 3332 Query 238 AGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGT 297 || || |||||||||||||||| || ||||||||| | | |||||| || | | Sbjct 3331 AGCCTGCCACCTATCCTACACATGCCAACACGAATGCCAGTGCAAAGCTAAAG----GTT 3276 Query 298 CCCGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||| |||| ||||| ||| | ||||||| || | | | ||||||| | Sbjct 3275 CATAGGGTCTTTCCGTCTGACCGCGGGAACCCCGCATCTTCACGGGGAATTCAATTTCGC 3216 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | |||| || | ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 3215 TGAGCCTATGCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 3156 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct 3155 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCT 3096 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 || ||| || | | | ||| ||||||||||||||| |||| Sbjct 3095 TCGATT----------CAGAGCTTG---------CACCCCTCCTCTTAACCTTCCGGCAC 3055 Query 538 CGGGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||||| || ||||| ||| Sbjct 3054 CGGGCAGGCGTCAGACCCTATACGTCG 3028 >seq9910 Length=308115 Score = 338 bits (374), Expect = 2e-90 Identities = 414/564 (73%), Gaps = 12/564 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||| |||| | ||| ||| ||| |||| | | ||||| || Sbjct 256750 TCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCTACGCGTGATTTCC 256809 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| |||||| | ||||| | | |||||||||| ||| ||||| | ||||||||| Sbjct 256810 GACCACGCTGAGCGCACCTTCGTACTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAG 256868 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||||||| || |||| | ||| ||| | ||| || |||||| || Sbjct 256869 TCAAACTACCCACCAGACATGGTCCTCGTCCCGGATAACGGGACAGAGTTAGAACCTCAA 256928 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || ||| |||||||||||| | | ||||| | | ||| |||| | | ||| || Sbjct 256929 TATTACCAGGGTGGTATTTCAAGGATGGCTCCATAGCAACTGGCGTCACTACTTCAAAGC 256988 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 |||||||||||||||||||| | | || |||| |||||| ||| ||||| | Sbjct 256989 CTCCCACCTATCCTACACAAGTAAGATCAAAGTTCAATGTCAAGCTGCAGTAAAGGTTCA 257048 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| |||||| | | ||||||| || | | | ||||||| | Sbjct 257049 CGGGGTCTTTCCGTCTAGCCGCGGGTACACCGCATCTTCACGGCGATTTCGATTTCACTG 257108 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 |||| || | |||||||| || ||| ||||||||||||||||||||||||||| Sbjct 257109 AGCCTCTGCTGGAGACAGCGCCCCCATCATTATGCCATTCGTGCAGGTCGGAACTTACCC 257168 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 257169 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 257228 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 || | || || | || ||| || | ||||||||||||||||| Sbjct 257229 GATCAAGAGCTTCGCTTAC----------GCTAACCCCATCAATTAACCTTCCAGCACCG 257278 Query 540 GGCAGGCGTCAGTCCGTATACCTC 563 ||||||| ||| || ||||| || Sbjct 257279 GGCAGGCATCACACCCTATACGTC 257302 >seq6993 Length=5165 Score = 320 bits (354), Expect = 6e-85 Identities = 410/564 (73%), Gaps = 21/564 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||||||||| |||| | ||| ||| || |||| | | ||| || Sbjct 3029 TCGACTTGTCAGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCGTCACGATGTCC 2970 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| || | ||||| | | ||||| |||| ||||||||| | ||||||||| Sbjct 2969 GACCGTAACTAGCGTACCTTCGAACTCCTCCTTTACCCTTTGGGAGGAGA-CCGCCCCAG 2911 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| || |||| ||||||||||| | || ||| | || ||||||||||| || Sbjct 2910 TCAAACTGCCTACCATGCACTGTCCCCGATCCGGATAACGGACCAAGGTTAGAACCTCAA 2851 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| |||||||||||| || ||||||| |||||||| | || ||| || Sbjct 2850 ACAAACCAGGGTGGTATTTCAAGGTCGGCTCCACAGAAACTAGCGTTCCTGCTTCAAAGC 2791 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||||||||||||||||| | | | || ||||| | |||||| ||| ||||| | Sbjct 2790 CTCCCACCTATCCTACACAGATTGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTTCA 2731 Query 301 -GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||| |||| | ||||| | | ||||| | || | | ||| ||| | | Sbjct 2730 TGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTG 2671 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | || ||| ||||||| || |||||||||||||||||||||||||||||||||| Sbjct 2670 AGTCTCTGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 2611 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| Sbjct 2610 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTC 2551 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 ||| | | || ||| ||| ||| |||| |||||||||||| Sbjct 2550 AATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCAGCACCG 2510 Query 540 GGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||| || ||||| || Sbjct 2509 GGCAGGCGTCACACCCTATACGTC 2486 >seq7320 Length=4144 Score = 313 bits (346), Expect = 8e-83 Identities = 413/566 (73%), Gaps = 25/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||| |||| | ||| ||| || |||| ||| || Sbjct 4102 TCGACTTGTCGGTCTCGCAGTTAAGCACGCTTTTGCCATTGCACTTTAGGTACGATGTCC 4043 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | || | ||||| | | ||||||||||| ||||||||| | ||||||||| Sbjct 4042 GACCGTACCAAGCGTACCTTCGAACTCCTCCGTTACACTTTGGGAGGAGA-CCGCCCCAG 3984 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| || |||| ||||||||||| | || ||| | || || ||||||| || Sbjct 3983 TCAAACTGCCTACCATGCACTGTCCCCGATCCCGATAAGGGACCTGGGTTAGAACCTCAA 3924 Query 181 TACGGTC-AGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 ||| | || ||||||||||||| || ||||| | |||||||| | | ||| || Sbjct 3923 -ACGCACCAGGGTGGTATTTCAACGTCGGCTCCATGAGAACTAGCGTCCTCACTTCAAAG 3865 Query 240 TCTCCCACCTATCCTACACAAA-CCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 ||||||||||||||||||| | ||| | ||| |||||| |||||| ||| ||||| Sbjct 3864 CCTCCCACCTATCCTACACAGATCCGTTCAAAAT-CCAATAAAAAGCTACAGTAAAGGTT 3806 Query 299 CC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | ||||||||| |||| | ||||| | | ||||| | || | | ||| ||| | Sbjct 3805 CATGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGC 3746 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || ||| ||||||| || |||||||||||||||||||||||||||||||| Sbjct 3745 TGAGTCTCTGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 3686 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || Sbjct 3685 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACT 3626 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||||| | | || ||| ||| ||| |||| |||||||||| Sbjct 3625 TCAATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCAGCAC 3585 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||| || ||||| || Sbjct 3584 CGGGCAGGCGTCACACCCTATACGTC 3559 >seq10654 Length=1634 Score = 257 bits (284), Expect = 6e-66 Identities = 321/435 (74%), Gaps = 24/435 (6%) Strand=Plus/Minus Query 132 ACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTC-AGA 190 |||| ||||||||||| | || ||| | || || ||||||| || ||| | || Sbjct 1634 ACCATGCACTGTCCCCGATCCCGATAAGGGACCTGGGTTAGAACCTCAA-ACGCACCAGG 1576 Query 191 GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTA 250 ||||||||||||| || ||||| | |||||||| | | ||| || |||||||||| Sbjct 1575 GTGGTATTTCAACGTCGGCTCCATGAGAACTAGCGTCCTCACTTCAAAGCCTCCCACCTA 1516 Query 251 TCCTACACAAA-CCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC-GGGGTCTT 308 ||||||||| | ||| | ||| ||||||| |||||| ||| ||||| | |||||||| Sbjct 1515 TCCTACACAGATCCGTTCAAAAT-CCAATACAAAGCTACAGTAAAGGTTCATGGGGTCTT 1457 Query 309 TTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGG 368 | |||| | ||||| | | ||||| | || | | ||| ||| | | | || ||| Sbjct 1456 TCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGG 1397 Query 369 TTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 428 ||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1396 AGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 1337 Query 429 TTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCG 488 |||||||||||||||| ||||||||||| ||||||||||||||| ||||||| | | Sbjct 1336 TTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAG 1277 Query 489 CCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGT 548 || ||| ||| ||| |||| ||||||||||||||||||||| Sbjct 1276 -CTTGCACCCCA----------TCA--------TTTAATCTTCCAGCACCGGGCAGGCGT 1236 Query 549 CAGTCCGTATACCTC 563 || || ||||| || Sbjct 1235 CACACCCTATACGTC 1221 >seq12938 Length=19539 Score = 183 bits (202), Expect = 1e-43 Identities = 231/315 (73%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| |||||||||| |||| | ||| ||| ||| |||| | | ||||| || Sbjct 13548 TCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCTACGCGTGATTTCC 13489 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| |||||| | ||||| | | |||||||||| ||| ||||| | ||||||||| Sbjct 13488 GACCACGCTGAGCGCACCTTCGTACTCCTCCGTTACTCTTTAGGAGGAGA-CCGCCCCAG 13430 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||||||| || |||| | ||| ||| | ||| || |||||| || Sbjct 13429 TCAAACTACCCACCAGACATGGTCCTCGTCCCGGATAACGGGACAGAGTTAGAACCTCAA 13370 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || ||| |||||||||||| | | ||||| | | ||| |||| | | ||| || Sbjct 13369 TATTACCAGGGTGGTATTTCAAGGATGGCTCCATAGCAACTGGCGTCACTACTTCAAAGC 13310 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGG-TCC 299 |||||||||||||||||||| | | || |||| |||||| ||| |||| || Sbjct 13309 CTCCCACCTATCCTACACAAGTAAGATCAAAGTTCAATGTCAAGCTGCAGTAAAGGTTCA 13250 Query 300 CGGGGTCTTTTCGTC 314 |||||||||| |||| Sbjct 13249 CGGGGTCTTTCCGTC 13235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702143635584