Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq10734 221 3e-53 seq9639 212 2e-50 seq7053 183 8e-42 seq6415 183 8e-42 seq9538 179 1e-40 seq9470 138 3e-28 seq11739 98.7 3e-16 seq646 93.3 1e-14 >seq10734 Length=9239 Score = 221 bits (244), Expect = 3e-53 Identities = 509/761 (67%), Gaps = 8/761 (1%) Strand=Plus/Plus Query 37688 GAAAACGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGC 37747 ||| |||||| ||| ||| || || || ||| |||||| | ||||| ||| | Sbjct 1255 GAACACGGCGCCGAGAAAAGTGATCGCACCGGCACCGGCACCCGCAGCGTGTTTGGCTGG 1314 Query 37748 CAGCTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATC 37807 ||| | || |||||| | || || || ||||| || || || || || |||| | Sbjct 1315 CAGATGCGTTTCAACCTGGCCGAAGGCTTCCCGCTGGTCACCACCAAGAAGCTGCACCTG 1374 Query 37808 CGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTG 37867 ||||| ||||| | || ||||| ||||| | || ||||| || ||| || |||| || Sbjct 1375 CGCTCGATCATCCACGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACATCGGCTACCTG 1434 Query 37868 CAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCG 37927 |||| || || ||| ||||| |||||||| ||||| || ||||| ||||||||| Sbjct 1435 AAGGACAACCAGGTACGGATCTGGGACGAGTGGGCCGACGACAATGGCGACCTCGGCCCG 1494 Query 37928 ATTTACGGCGCGCAATGGCGCTCGTGGAA----GGGAGCAGACGGGAAAACCATCGACCA 37983 | |||||| ||| |||||| ||| | || || || |||||||| Sbjct 1495 GTCTACGGCAAGCAGTGGCGCAGCTGGGCCACCGCCTGCCGATGGCGGTGAGATCGACCA 1554 Query 37984 GATCGCA-TGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGA 38042 ||| ||| ||| | || || |||||||| || || ||| |||| || |||||| |||| | Sbjct 1555 GAT-GCAGTGGCTGGTGGACGAGATCAAGCGCAACCCGGATTCGCGTCGGCTGGTGGTCA 1613 Query 38043 GCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTC 38102 |||| ||||| || | || | ||||| |||| |||||| || || || | Sbjct 1614 GCGCCTGGAACGTGGGCGAGCTCTCTCAGATGGCGCTGATGCCGTGCCACAACCTGTTCC 1673 Query 38103 AGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGT 38162 ||||||| || | ||||| | | ||| | | | |||||| || || | | Sbjct 1674 AGTTCTACGTGGTGGACGGCAAGCTCAGCTGCCAGCTGTACCAGCGCAGCGGCGACATCT 1733 Query 38163 TTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAAC 38222 | | || ||||||| |||||||| |||||||||||| |||| || ||||| || || Sbjct 1734 TCCTCGGAGTGCCGTTCAACATCGCCAGCTACGCGCTGCTGACCCACATGGTGGCGCAGG 1793 Query 38223 AATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAA 38282 || | ||| || || || || | ||| ||||| | || |||| | Sbjct 1794 CCACCGGCCTGGGCGTGGGCGACTTCGTGCACACGCTGGGCGATGCGCACCTGTATTCGA 1853 Query 38283 ATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTG 38342 | || | || || ||| ||||||| |||| || |||||| ||||||||| ||| Sbjct 1854 ACCACTTCGAGCAGGCGCGCGAGCAGCTGTCGCGTGAACCGCGCGCGCTGCCGACGCTGT 1913 Query 38343 TGCTGAA-ACGGAAGCCGCCGTCTATCTTTGACTATGAATACGACGACTTTGAAATCGTC 38401 | |||| |||| | ||| | | || | || | | ||||||| | |||| | Sbjct 1914 GGTTGAACCCGGAGGTGACCGAC-CTGTTCGGCTTCCAGTTCGACGACATCCGCATCGAC 1972 Query 38402 GGCTACGATCCGCATCCGGCGATTAAAGCACCGGTGGCGGT 38442 |||||||| ||||| ||||| || || || ||||||||||| Sbjct 1973 GGCTACGACCCGCACCCGGCCATCAAGGCGCCGGTGGCGGT 2013 >seq9639 Length=103419 Score = 212 bits (234), Expect = 2e-50 Identities = 472/703 (67%), Gaps = 8/703 (1%) Strand=Plus/Minus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || ||| ||||||| |||||||||| |||| | |||||| || | Sbjct 4294 GACCGTACCGGCACGGGCACGCGCAGCGTGTTCGGCCACCAGATGCGCTTCGACCTGTCC 4235 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 || || |||||||| || || || || || |||| || |||||||| |||||| Sbjct 4234 GAAGGCTTTCCGCTGGTCACCACCAAGAAGGTGCACCTCAAGTCCATCATCCTGGAACTG 4175 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | ||||| | || || |||| |||||||| ||| || || Sbjct 4174 CTGTGGTTCCTGCGCGGCGACAGCAATGTGCGCTGGCTGCAGGAGCGCGGCTGCACCATC 4115 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 ||||| || ||||| ||| ||||||| || |||||| | || |||| |||||||||| Sbjct 4114 TGGGACGAATGGGCCCGCGAGGACGGCGACCTGGGCCCGGTCTATGGCGTGCAATGGCGC 4055 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATC 38008 ||| | | ||||| ||||||||||||||| || ||| | || || Sbjct 4054 AACTGGCCGACGCCGGACGGCGGCCACATCGACCAGATCGCCGAAGTGGTCAAGCAGCTC 3995 Query 38009 AAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGAC 38068 || | || ||| | ||||| | | || ||||| ||||| || || || || Sbjct 3994 AAGAGCAACCCGGACAGCCGCCGCATCATCGTCAGCGCCTGGAACGTGGCCGACCTGCCG 3935 Query 38069 GAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTG 38128 ||||| ||| ||| || || | ||| |||||||| || ||| ||||| | | Sbjct 3934 CAGATGGCGCTCATGCCCTGCCACGCCTTCTTCCAGTTCTACGTGGCCGACGGCAAGCTC 3875 Query 38129 TCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCG 38188 ||| | | | |||||| || || | || | || | || || |||||||| Sbjct 3874 AGCTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCTTCAACATCGCC 3815 Query 38189 AGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACTC 38248 |||||||||||| |||| || ||| | ||||| ||||||||| |||| || || || || Sbjct 3814 AGCTACGCGCTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGGAGGTGGGCGACTTC 3755 Query 38249 ATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAG--CGAAACTGC 38306 || | |||||||||||| ||| | ||||| || || || | | || ||| || | Sbjct 3754 ATCTGGACCGGCGGCGACTGCCACATCTACAACAACCA-CTTCACCCAGGTCGAGAC-CC 3697 Query 38307 AGCTGACGCGCGAGCC--GCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTC 38364 ||||| ||||| |||| |||| | |||| |||| | | || || ||| || Sbjct 3696 AGCTGGCGCGCCAGCCCTTCGCCTAC--CCGACGCTTCAGATCAAGCGCCGGCCCGACTC 3639 Query 38365 TATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTAC 38407 ||||| | ||| || ||||| ||||| || ||||||||||| Sbjct 3638 CATCTTCGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTAC 3596 >seq7053 Length=464797 Score = 183 bits (202), Expect = 8e-42 Identities = 382/569 (67%), Gaps = 0/569 (0%) Strand=Plus/Minus Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGAC 37711 |||||||||||| | || | || | | || | |||| |||| ||| | |||| Sbjct 70897 ATGAAACAATATCTCGATCTTCTCCGGCATGTCATGGAAACCGGCTCCGACCGCGGAGAC 70838 Query 37712 CGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGAT 37771 || || ||| || |||| ||||| ||||| |||| | |||||| || | || Sbjct 70837 CGCACCGGCACGGGTACGCGCTCGGTCTTCGGTTACCAGATGCGCTTCGACCTTTCCGAA 70778 Query 37772 GGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTT 37831 || |||||| | | || || || || ||||| | ||||||||||| ||||| |||| Sbjct 70777 GGTTTTCCGGTTCTCACCACCAAGAAGCTGCATCTGCGCTCCATCATCCATGAATTGCTG 70718 Query 37832 TGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGG 37891 ||||| | || |||||||| || || |||| | |||| || ||||| | || ||| Sbjct 70717 TGGTTCCTGAAGGGCGATACCAATATCGCCTATCTCAAGGAAAACGGCGTTTCCATCTGG 70658 Query 37892 GATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCG 37951 || || ||||| ||||| |||||||||||||||||| | || || ||||| ||||| || Sbjct 70657 GACGAATGGGCCGACGAGAACGGCGATCTCGGCCCGGTCTATGGTGCGCAGTGGCGTTCC 70598 Query 37952 TGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAAA 38011 ||| || | ||||| |||||||||||||| | |||| | | || Sbjct 70597 TGGCCGGCGCCGGACGGCCGCCATATCGACCAGATCGCGCTTCTGATCGAGGGTCTGAAG 70538 Query 38012 CGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAG 38071 || ||| |||| || || | | || || ||||| || ||||||| Sbjct 70537 ACCAACCCGAATTCCCGTCGTCACATCGTTTCGGCGTGGAACCCGGCGCTGGTGGACGAA 70478 Query 38072 ATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCA 38131 ||| | ||||||| ||||| | | || ||||||||||| || | || | |||| Sbjct 70477 ATGGCGTTGCCGCCCTGTCACTGCCTGTTCCAGTTCTATGTTTCCGATGGAAAGCTGTCC 70418 Query 38132 TGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGC 38191 ||| | | |||||||| | |||| || | || ||||||| |||||||| | Sbjct 70417 TGCCAGCTCTATCAGCGCTCTGCCGATATCTTCCTCGGCGTGCCGTTCAACATCGCCTCC 70358 Query 38192 TACGCGCTGTTGACGCATATGGTAGCCCA 38220 || |||||| |||| | ||||| || || Sbjct 70357 TATGCGCTGCTGACACTGATGGTGGCGCA 70329 >seq6415 Length=247467 Score = 183 bits (202), Expect = 8e-42 Identities = 369/543 (68%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 37679 GACATCTTAGAAAACGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTG 37738 |||||| | || |||||||| | | ||||| |||||| |||||||||| ||| Sbjct 52939 GACATCCTCGAGAACGGCGTTCAGCGCGGCGACCGCACGGGCACCGGCACGCTGGGCGTG 52998 Query 37739 TTCGGCCGCCAGCTCCGCTTC-AACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAA 37797 |||||||| ||| |||||||| | || | | | || || ||| | |||| | || || Sbjct 52999 TTCGGCCGGCAGATCCGCTTCGATCTGGCCA-AGGGCTTCCCGGTTCTGACCTCCAAGAA 53057 Query 37798 ATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGT 37857 |||| | ||||| ||||| || ||||| ||||| | || ||||| || ||| | Sbjct 53058 GCTGCACCTGCGCTCGATCATCATCGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACAT 53117 Query 37858 CCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGA 37917 | ||| | |||| || |||||| || ||||| |||||||| |||||||||||||| Sbjct 53118 CGCCTACCTCAAGGACAACGGCGTGCGCATCTGGGACGAGTGGGCCGACGAAAACGGCGA 53177 Query 37918 TCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCAT 37977 ||| |||||| | |||||| ||| |||||||||||| | | |||||| || Sbjct 53178 TCTTGGCCCGGTCTACGGCAAGCAGTGGCGCTCGTGGGCGACGCCGGACGGGCGCGTGAT 53237 Query 37978 CGACCAGATCGCATGGGTTGTCGAAGAGATCAAACGAAATCC--GCATTCACGCCGGCTG 38035 |||||||||||| | |||||| | | || ||||| ||| ||||| | Sbjct 53238 CGACCAGATCGCCAACCTGGTCGAAAACCTAAAGACCAATCCAAGCA--GCCGCCGCCAC 53295 Query 38036 CTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTAC 38095 | || | || ||||| || || | ||||| ||| |||||||| || || | | Sbjct 53296 ATCGTCACGGCCTGGAACCCCGCCGATGTCGACGACATGGCCCTGCCGCCCTGCCACTGC 53355 Query 38096 GCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTT 38155 || ||||||| ||||| |||| | || ||| | | || ||| || Sbjct 53356 CTGTTCCAGTTCTTCGTCGCGGACGGAAAGCTGAGCTGCCAGCTCTATCAACGCAGCGCC 53415 Query 38156 GATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTA 38215 || ||| |||||| ||||||| |||||||| |||||| ||| |||| | ||||| Sbjct 53416 GACGTGTTCTTAGGGGTGCCGTTCAACATCGCCTCCTACGCCCTGCTGACCCTGATGGTC 53475 Query 38216 GCC 38218 ||| Sbjct 53476 GCC 53478 >seq9538 Length=646221 Score = 179 bits (198), Expect = 1e-40 Identities = 349/513 (68%), Gaps = 2/513 (0%) Strand=Plus/Plus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| || ||| |||||| | |||||||||||| ||| | || ||| | | Sbjct 486501 GACCGCACCGGCACCGGCACACGCTCGGTGTTCGGCTATCAGATGCGTTTCGATCTGGCC 486560 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 || || || ||| | | || || || ||| |||| | || ||||| | ||||| Sbjct 486561 GACGGCTTCCCGGTGCTTACCACCAAGAAACTGCACCTGAAGTCGATCATCCACGAACTT 486620 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || |||||| | |||||||| ||| || ||| || | || | ||||| || || Sbjct 486621 CTGTGGTTTCTGGCCGGCGATACCAACATCAAATATCTGAACGACCACGGCGTCACCATC 486680 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 ||||| ||||||||||| | || ||||||||||||||| | || ||| ||| |||||| Sbjct 486681 TGGGACGAGTGGGCGGATGCCAAGGGCGATCTCGGCCCGGTCTATGGCAAGCAGTGGCGC 486740 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATC 38008 || ||| || || | || |||||||||||||||| | | || || ||| Sbjct 486741 TCCTGGCCGGATGCGCATGGCGGCACCATCGACCAGATCGAAAATCTGCTCCGCGAAATC 486800 Query 38009 AAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGAC 38068 | ||||| |||||||||||||| | || || |||||| || || |||| Sbjct 486801 CGCTGCAATCCTTATTCACGCCGGCTGATCGTCTCGGCATGGAATCCGGCCGAGGTGGAG 486860 Query 38069 GAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTG 38128 | ||| ||||||||| || || | | || |||||||| || | |||| ||| || Sbjct 486861 GCAATGGCGCTGCCGCCCTGCCACTGCCTGTTCCAGTTCTACGTTTCGGACGGACGGCTG 486920 Query 38129 TCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCG 38188 |||||| | | ||||| |||| || | ||| | || ||||||| |||||||| Sbjct 486921 TCATGCCAGCTCTACCAGCGTTCCGCGGACATCTTTCTCGGCGTGCCGTTCAACATCGCT 486980 Query 38189 AGCTACGCGCTGTTGACGCAT-ATGGTAGCCCA 38220 ||| |||||| | || ||| ||||| || || Sbjct 486981 TCCTATGCGCTGCTCAC-CATGATGGTGGCGCA 487012 >seq9470 Length=127963 Score = 138 bits (152), Expect = 3e-28 Identities = 413/634 (65%), Gaps = 4/634 (1%) Strand=Plus/Minus Query 37691 AACGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAG 37750 ||||||||| | | ||||| || ||| |||||| ||| || |||||||||||| Sbjct 53222 AACGGCGTCCAGCGCGGCGACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGCCGCCAG 53163 Query 37751 CTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGC 37810 | |||||| || | || |||||||| |||| || || || |||| | ||| Sbjct 53162 ATGCGCTTCGACCTGGCGCGGGGCTTTCCGCTGCTGACCACCAAGAAGCTGCACCTGCGC 53103 Query 37811 TCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAG 37870 || ||||| || || || ||||| | ||||| || ||| || || || || Sbjct 53102 TCGATCATCGTCGAGCTTCTGTGGTTCCTGCGCGGCGAGACCAACATCGCCTGGCTGAAG 53043 Query 37871 GAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATT 37930 || || || || | || ||||| || ||||| |||| | ||||| ||||| ||| | Sbjct 53042 GACAACGGGGTCAGCATCTGGGACGAATGGGCCGACGCCGAGGGCGAGCTCGGTCCGGTC 52983 Query 37931 TACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCA 37990 |||||| ||| |||||||||||| || | ||||| |||||||||||||| Sbjct 52982 TACGGCAAGCAGTGGCGCTCGTGGGCGGCGCCCGACGGCCGCGTGATCGACCAGATCGCC 52923 Query 37991 TGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCA--CGCCGGCTGCTGGTGAGCGCTT 38048 || ||||| | |||| || | || || || ||||| | | || || | Sbjct 52922 AATGTGGTCGAGGCGATC-CGCGCCAACCCCA-ACAGCCGCCGCCACATCGTCTCGGCCT 52865 Query 38049 GGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCT 38108 |||| || || | ||||| ||| ||||||||||| || | | || ||||||| Sbjct 52864 GGAACCCGGCCGACGTCGACGACATGGCCCTGCCGCCGTGCCACTGCCTGTTCCAGTTCT 52805 Query 38109 ATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAG 38168 || || |||| |||| ||| || | |||||||| | || ||| | | Sbjct 52804 TCGTGGCGGACGGAAAACTGTCCTGCCTGCTTTACCAGCGCTCGGCCGACCTGTTCCTCG 52745 Query 38169 GGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCG 38228 | ||||||| |||||||| |||||| ||| |||| | ||| ||||| || Sbjct 52744 GCGTGCCGTTCAACATCGCCTCCTACGCCCTGCTGACCCTGATGACGGCCCAGGCCACCG 52685 Query 38229 ACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATC 38288 | || | ||| || || | |||| ||||||| ||| | || || ||| Sbjct 52684 GCCTGCAGCCCGGCGAGTTCGTGCACACCCTGGGCGACGCCCACCTCTATCTGAACCATG 52625 Query 38289 TGGAACAAGCGAAACTGCAGCTGACGCGCGAGCC 38322 | || || ||||| |||||||| | |||||||| Sbjct 52624 TCGAGCAGGCGAAGCTGCAGCTCTCCCGCGAGCC 52591 >seq11739 Length=237542 Score = 98.7 bits (108), Expect = 3e-16 Identities = 171/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGAC 37711 |||||| ||||||||| | || ||| | ||| |||| | |||| || |||| || Sbjct 9478 ATGAAAGCGTATTTAGACCTTCTACAACATATCCTAGACGATGGCGGTGACAAAGGTGAT 9419 Query 37712 CGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGAT 37771 || || || || || | || || || || | || | || || |||| | | Sbjct 9418 CGTACTGGTACAGGTACTCGTTCTGTATTTGGTCATCAAATGCGTTTTGACTTGTCAAAA 9359 Query 37772 GGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTT 37831 || |||||||| | || || |||||| | ||| |||||||||| | ||||||||| Sbjct 9358 GGGTTTCCGCTACTAACCACTAAAAAAATTCATTTCCGCTCCATTGTGATTGAACTGCTG 9299 Query 37832 TGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGG 37891 ||||| |||||||||| || ||||| | ||| | | || ||| || |||||||| Sbjct 9298 TGGTTCCTAAAAGGCGACACCAACGTTCAATATCTTAAAGACAATAAAGTTTCGATTTGG 9239 Query 37892 GATGAGTGG 37900 ||||| ||| Sbjct 9238 GATGAATGG 9230 >seq646 Length=687 Score = 93.3 bits (102), Expect = 1e-14 Identities = 129/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 38044 CGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCA 38103 ||| |||||| || || | ||| ||||| ||||||||| ||||| | | ||||| Sbjct 436 CGCCTGGAATCCGGCCGATGTCGACAAGATGGCGCTGCCGCCCTGTCACTGCCTGTTTCA 377 Query 38104 GTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTT 38163 |||||| |||||||| |||||| |||| ||| | | |||||||| | ||| ||| Sbjct 376 GTTCTACGTCGCCAAGGGCCGGCTGTCCTGCCAGCTCTACCAGCGCTCGGCGGATGTGTT 317 Query 38164 TTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCAT-ATGGTAGCCCA 38220 | || |||| || ||||||||| ||| || ||| |||| ||| ||||| || || Sbjct 316 CCTCGGCGTGCCCTTCAACATCGCGTCCTATGCCCTGCTGAC-CATGATGGTCGCGCA 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130616638220350