Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq10734 221 3e-53
seq9639 212 2e-50
seq7053 183 8e-42
seq6415 183 8e-42
seq9538 179 1e-40
seq9470 138 3e-28
seq11739 98.7 3e-16
seq646 93.3 1e-14
>seq10734
Length=9239
Score = 221 bits (244), Expect = 3e-53
Identities = 509/761 (67%), Gaps = 8/761 (1%)
Strand=Plus/Plus
Query 37688 GAAAACGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGC 37747
||| |||||| ||| ||| || || || ||| |||||| | ||||| ||| |
Sbjct 1255 GAACACGGCGCCGAGAAAAGTGATCGCACCGGCACCGGCACCCGCAGCGTGTTTGGCTGG 1314
Query 37748 CAGCTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATC 37807
||| | || |||||| | || || || ||||| || || || || || |||| |
Sbjct 1315 CAGATGCGTTTCAACCTGGCCGAAGGCTTCCCGCTGGTCACCACCAAGAAGCTGCACCTG 1374
Query 37808 CGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTG 37867
||||| ||||| | || ||||| ||||| | || ||||| || ||| || |||| ||
Sbjct 1375 CGCTCGATCATCCACGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACATCGGCTACCTG 1434
Query 37868 CAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCG 37927
|||| || || ||| ||||| |||||||| ||||| || ||||| |||||||||
Sbjct 1435 AAGGACAACCAGGTACGGATCTGGGACGAGTGGGCCGACGACAATGGCGACCTCGGCCCG 1494
Query 37928 ATTTACGGCGCGCAATGGCGCTCGTGGAA----GGGAGCAGACGGGAAAACCATCGACCA 37983
| |||||| ||| |||||| ||| | || || || ||||||||
Sbjct 1495 GTCTACGGCAAGCAGTGGCGCAGCTGGGCCACCGCCTGCCGATGGCGGTGAGATCGACCA 1554
Query 37984 GATCGCA-TGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGA 38042
||| ||| ||| | || || |||||||| || || ||| |||| || |||||| |||| |
Sbjct 1555 GAT-GCAGTGGCTGGTGGACGAGATCAAGCGCAACCCGGATTCGCGTCGGCTGGTGGTCA 1613
Query 38043 GCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTC 38102
|||| ||||| || | || | ||||| |||| |||||| || || || |
Sbjct 1614 GCGCCTGGAACGTGGGCGAGCTCTCTCAGATGGCGCTGATGCCGTGCCACAACCTGTTCC 1673
Query 38103 AGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGT 38162
||||||| || | ||||| | | ||| | | | |||||| || || | |
Sbjct 1674 AGTTCTACGTGGTGGACGGCAAGCTCAGCTGCCAGCTGTACCAGCGCAGCGGCGACATCT 1733
Query 38163 TTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAAC 38222
| | || ||||||| |||||||| |||||||||||| |||| || ||||| || ||
Sbjct 1734 TCCTCGGAGTGCCGTTCAACATCGCCAGCTACGCGCTGCTGACCCACATGGTGGCGCAGG 1793
Query 38223 AATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAA 38282
|| | ||| || || || || | ||| ||||| | || |||| |
Sbjct 1794 CCACCGGCCTGGGCGTGGGCGACTTCGTGCACACGCTGGGCGATGCGCACCTGTATTCGA 1853
Query 38283 ATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTG 38342
| || | || || ||| ||||||| |||| || |||||| ||||||||| |||
Sbjct 1854 ACCACTTCGAGCAGGCGCGCGAGCAGCTGTCGCGTGAACCGCGCGCGCTGCCGACGCTGT 1913
Query 38343 TGCTGAA-ACGGAAGCCGCCGTCTATCTTTGACTATGAATACGACGACTTTGAAATCGTC 38401
| |||| |||| | ||| | | || | || | | ||||||| | |||| |
Sbjct 1914 GGTTGAACCCGGAGGTGACCGAC-CTGTTCGGCTTCCAGTTCGACGACATCCGCATCGAC 1972
Query 38402 GGCTACGATCCGCATCCGGCGATTAAAGCACCGGTGGCGGT 38442
|||||||| ||||| ||||| || || || |||||||||||
Sbjct 1973 GGCTACGACCCGCACCCGGCCATCAAGGCGCCGGTGGCGGT 2013
>seq9639
Length=103419
Score = 212 bits (234), Expect = 2e-50
Identities = 472/703 (67%), Gaps = 8/703 (1%)
Strand=Plus/Minus
Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768
||||| || ||| ||||||| |||||||||| |||| | |||||| || |
Sbjct 4294 GACCGTACCGGCACGGGCACGCGCAGCGTGTTCGGCCACCAGATGCGCTTCGACCTGTCC 4235
Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828
|| || |||||||| || || || || || |||| || |||||||| ||||||
Sbjct 4234 GAAGGCTTTCCGCTGGTCACCACCAAGAAGGTGCACCTCAAGTCCATCATCCTGGAACTG 4175
Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888
|| ||||| | ||||| | || || |||| |||||||| ||| || ||
Sbjct 4174 CTGTGGTTCCTGCGCGGCGACAGCAATGTGCGCTGGCTGCAGGAGCGCGGCTGCACCATC 4115
Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948
||||| || ||||| ||| ||||||| || |||||| | || |||| ||||||||||
Sbjct 4114 TGGGACGAATGGGCCCGCGAGGACGGCGACCTGGGCCCGGTCTATGGCGTGCAATGGCGC 4055
Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATC 38008
||| | | ||||| ||||||||||||||| || ||| | || ||
Sbjct 4054 AACTGGCCGACGCCGGACGGCGGCCACATCGACCAGATCGCCGAAGTGGTCAAGCAGCTC 3995
Query 38009 AAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGAC 38068
|| | || ||| | ||||| | | || ||||| ||||| || || || ||
Sbjct 3994 AAGAGCAACCCGGACAGCCGCCGCATCATCGTCAGCGCCTGGAACGTGGCCGACCTGCCG 3935
Query 38069 GAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTG 38128
||||| ||| ||| || || | ||| |||||||| || ||| ||||| | |
Sbjct 3934 CAGATGGCGCTCATGCCCTGCCACGCCTTCTTCCAGTTCTACGTGGCCGACGGCAAGCTC 3875
Query 38129 TCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCG 38188
||| | | | |||||| || || | || | || | || || ||||||||
Sbjct 3874 AGCTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTTCCCTTCAACATCGCC 3815
Query 38189 AGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACTC 38248
|||||||||||| |||| || ||| | ||||| ||||||||| |||| || || || ||
Sbjct 3814 AGCTACGCGCTGCTGACCCACATGCTGGCCCAGCAATGCGACCTGGAGGTGGGCGACTTC 3755
Query 38249 ATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAG--CGAAACTGC 38306
|| | |||||||||||| ||| | ||||| || || || | | || ||| || |
Sbjct 3754 ATCTGGACCGGCGGCGACTGCCACATCTACAACAACCA-CTTCACCCAGGTCGAGAC-CC 3697
Query 38307 AGCTGACGCGCGAGCC--GCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTC 38364
||||| ||||| |||| |||| | |||| |||| | | || || ||| ||
Sbjct 3696 AGCTGGCGCGCCAGCCCTTCGCCTAC--CCGACGCTTCAGATCAAGCGCCGGCCCGACTC 3639
Query 38365 TATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTAC 38407
||||| | ||| || ||||| ||||| || |||||||||||
Sbjct 3638 CATCTTCGGCTACGAGTACGAGGACTTCGAGGTCGTCGGCTAC 3596
>seq7053
Length=464797
Score = 183 bits (202), Expect = 8e-42
Identities = 382/569 (67%), Gaps = 0/569 (0%)
Strand=Plus/Minus
Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGAC 37711
|||||||||||| | || | || | | || | |||| |||| ||| | ||||
Sbjct 70897 ATGAAACAATATCTCGATCTTCTCCGGCATGTCATGGAAACCGGCTCCGACCGCGGAGAC 70838
Query 37712 CGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGAT 37771
|| || ||| || |||| ||||| ||||| |||| | |||||| || | ||
Sbjct 70837 CGCACCGGCACGGGTACGCGCTCGGTCTTCGGTTACCAGATGCGCTTCGACCTTTCCGAA 70778
Query 37772 GGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTT 37831
|| |||||| | | || || || || ||||| | ||||||||||| ||||| ||||
Sbjct 70777 GGTTTTCCGGTTCTCACCACCAAGAAGCTGCATCTGCGCTCCATCATCCATGAATTGCTG 70718
Query 37832 TGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGG 37891
||||| | || |||||||| || || |||| | |||| || ||||| | || |||
Sbjct 70717 TGGTTCCTGAAGGGCGATACCAATATCGCCTATCTCAAGGAAAACGGCGTTTCCATCTGG 70658
Query 37892 GATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCG 37951
|| || ||||| ||||| |||||||||||||||||| | || || ||||| ||||| ||
Sbjct 70657 GACGAATGGGCCGACGAGAACGGCGATCTCGGCCCGGTCTATGGTGCGCAGTGGCGTTCC 70598
Query 37952 TGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAAA 38011
||| || | ||||| |||||||||||||| | |||| | | ||
Sbjct 70597 TGGCCGGCGCCGGACGGCCGCCATATCGACCAGATCGCGCTTCTGATCGAGGGTCTGAAG 70538
Query 38012 CGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAG 38071
|| ||| |||| || || | | || || ||||| || |||||||
Sbjct 70537 ACCAACCCGAATTCCCGTCGTCACATCGTTTCGGCGTGGAACCCGGCGCTGGTGGACGAA 70478
Query 38072 ATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCA 38131
||| | ||||||| ||||| | | || ||||||||||| || | || | ||||
Sbjct 70477 ATGGCGTTGCCGCCCTGTCACTGCCTGTTCCAGTTCTATGTTTCCGATGGAAAGCTGTCC 70418
Query 38132 TGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGC 38191
||| | | |||||||| | |||| || | || ||||||| |||||||| |
Sbjct 70417 TGCCAGCTCTATCAGCGCTCTGCCGATATCTTCCTCGGCGTGCCGTTCAACATCGCCTCC 70358
Query 38192 TACGCGCTGTTGACGCATATGGTAGCCCA 38220
|| |||||| |||| | ||||| || ||
Sbjct 70357 TATGCGCTGCTGACACTGATGGTGGCGCA 70329
>seq6415
Length=247467
Score = 183 bits (202), Expect = 8e-42
Identities = 369/543 (68%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 37679 GACATCTTAGAAAACGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTG 37738
|||||| | || |||||||| | | ||||| |||||| |||||||||| |||
Sbjct 52939 GACATCCTCGAGAACGGCGTTCAGCGCGGCGACCGCACGGGCACCGGCACGCTGGGCGTG 52998
Query 37739 TTCGGCCGCCAGCTCCGCTTC-AACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAA 37797
|||||||| ||| |||||||| | || | | | || || ||| | |||| | || ||
Sbjct 52999 TTCGGCCGGCAGATCCGCTTCGATCTGGCCA-AGGGCTTCCCGGTTCTGACCTCCAAGAA 53057
Query 37798 ATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGT 37857
|||| | ||||| ||||| || ||||| ||||| | || ||||| || ||| |
Sbjct 53058 GCTGCACCTGCGCTCGATCATCATCGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACAT 53117
Query 37858 CCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGA 37917
| ||| | |||| || |||||| || ||||| |||||||| ||||||||||||||
Sbjct 53118 CGCCTACCTCAAGGACAACGGCGTGCGCATCTGGGACGAGTGGGCCGACGAAAACGGCGA 53177
Query 37918 TCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCAT 37977
||| |||||| | |||||| ||| |||||||||||| | | |||||| ||
Sbjct 53178 TCTTGGCCCGGTCTACGGCAAGCAGTGGCGCTCGTGGGCGACGCCGGACGGGCGCGTGAT 53237
Query 37978 CGACCAGATCGCATGGGTTGTCGAAGAGATCAAACGAAATCC--GCATTCACGCCGGCTG 38035
|||||||||||| | |||||| | | || ||||| ||| ||||| |
Sbjct 53238 CGACCAGATCGCCAACCTGGTCGAAAACCTAAAGACCAATCCAAGCA--GCCGCCGCCAC 53295
Query 38036 CTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTAC 38095
| || | || ||||| || || | ||||| ||| |||||||| || || | |
Sbjct 53296 ATCGTCACGGCCTGGAACCCCGCCGATGTCGACGACATGGCCCTGCCGCCCTGCCACTGC 53355
Query 38096 GCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTT 38155
|| ||||||| ||||| |||| | || ||| | | || ||| ||
Sbjct 53356 CTGTTCCAGTTCTTCGTCGCGGACGGAAAGCTGAGCTGCCAGCTCTATCAACGCAGCGCC 53415
Query 38156 GATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTA 38215
|| ||| |||||| ||||||| |||||||| |||||| ||| |||| | |||||
Sbjct 53416 GACGTGTTCTTAGGGGTGCCGTTCAACATCGCCTCCTACGCCCTGCTGACCCTGATGGTC 53475
Query 38216 GCC 38218
|||
Sbjct 53476 GCC 53478
>seq9538
Length=646221
Score = 179 bits (198), Expect = 1e-40
Identities = 349/513 (68%), Gaps = 2/513 (0%)
Strand=Plus/Plus
Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768
||||| || ||| |||||| | |||||||||||| ||| | || ||| | |
Sbjct 486501 GACCGCACCGGCACCGGCACACGCTCGGTGTTCGGCTATCAGATGCGTTTCGATCTGGCC 486560
Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828
|| || || ||| | | || || || ||| |||| | || ||||| | |||||
Sbjct 486561 GACGGCTTCCCGGTGCTTACCACCAAGAAACTGCACCTGAAGTCGATCATCCACGAACTT 486620
Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888
|| |||||| | |||||||| ||| || ||| || | || | ||||| || ||
Sbjct 486621 CTGTGGTTTCTGGCCGGCGATACCAACATCAAATATCTGAACGACCACGGCGTCACCATC 486680
Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948
||||| ||||||||||| | || ||||||||||||||| | || ||| ||| ||||||
Sbjct 486681 TGGGACGAGTGGGCGGATGCCAAGGGCGATCTCGGCCCGGTCTATGGCAAGCAGTGGCGC 486740
Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATC 38008
|| ||| || || | || |||||||||||||||| | | || || |||
Sbjct 486741 TCCTGGCCGGATGCGCATGGCGGCACCATCGACCAGATCGAAAATCTGCTCCGCGAAATC 486800
Query 38009 AAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGAC 38068
| ||||| |||||||||||||| | || || |||||| || || ||||
Sbjct 486801 CGCTGCAATCCTTATTCACGCCGGCTGATCGTCTCGGCATGGAATCCGGCCGAGGTGGAG 486860
Query 38069 GAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTG 38128
| ||| ||||||||| || || | | || |||||||| || | |||| ||| ||
Sbjct 486861 GCAATGGCGCTGCCGCCCTGCCACTGCCTGTTCCAGTTCTACGTTTCGGACGGACGGCTG 486920
Query 38129 TCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCG 38188
|||||| | | ||||| |||| || | ||| | || ||||||| ||||||||
Sbjct 486921 TCATGCCAGCTCTACCAGCGTTCCGCGGACATCTTTCTCGGCGTGCCGTTCAACATCGCT 486980
Query 38189 AGCTACGCGCTGTTGACGCAT-ATGGTAGCCCA 38220
||| |||||| | || ||| ||||| || ||
Sbjct 486981 TCCTATGCGCTGCTCAC-CATGATGGTGGCGCA 487012
>seq9470
Length=127963
Score = 138 bits (152), Expect = 3e-28
Identities = 413/634 (65%), Gaps = 4/634 (1%)
Strand=Plus/Minus
Query 37691 AACGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAG 37750
||||||||| | | ||||| || ||| |||||| ||| || ||||||||||||
Sbjct 53222 AACGGCGTCCAGCGCGGCGACCGCACCGGCACCGGCACCCTGGGCGTCTTCGGCCGCCAG 53163
Query 37751 CTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGC 37810
| |||||| || | || |||||||| |||| || || || |||| | |||
Sbjct 53162 ATGCGCTTCGACCTGGCGCGGGGCTTTCCGCTGCTGACCACCAAGAAGCTGCACCTGCGC 53103
Query 37811 TCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAG 37870
|| ||||| || || || ||||| | ||||| || ||| || || || ||
Sbjct 53102 TCGATCATCGTCGAGCTTCTGTGGTTCCTGCGCGGCGAGACCAACATCGCCTGGCTGAAG 53043
Query 37871 GAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATT 37930
|| || || || | || ||||| || ||||| |||| | ||||| ||||| ||| |
Sbjct 53042 GACAACGGGGTCAGCATCTGGGACGAATGGGCCGACGCCGAGGGCGAGCTCGGTCCGGTC 52983
Query 37931 TACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCA 37990
|||||| ||| |||||||||||| || | ||||| ||||||||||||||
Sbjct 52982 TACGGCAAGCAGTGGCGCTCGTGGGCGGCGCCCGACGGCCGCGTGATCGACCAGATCGCC 52923
Query 37991 TGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCA--CGCCGGCTGCTGGTGAGCGCTT 38048
|| ||||| | |||| || | || || || ||||| | | || || |
Sbjct 52922 AATGTGGTCGAGGCGATC-CGCGCCAACCCCA-ACAGCCGCCGCCACATCGTCTCGGCCT 52865
Query 38049 GGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCT 38108
|||| || || | ||||| ||| ||||||||||| || | | || |||||||
Sbjct 52864 GGAACCCGGCCGACGTCGACGACATGGCCCTGCCGCCGTGCCACTGCCTGTTCCAGTTCT 52805
Query 38109 ATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAG 38168
|| || |||| |||| ||| || | |||||||| | || ||| | |
Sbjct 52804 TCGTGGCGGACGGAAAACTGTCCTGCCTGCTTTACCAGCGCTCGGCCGACCTGTTCCTCG 52745
Query 38169 GGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCG 38228
| ||||||| |||||||| |||||| ||| |||| | ||| ||||| ||
Sbjct 52744 GCGTGCCGTTCAACATCGCCTCCTACGCCCTGCTGACCCTGATGACGGCCCAGGCCACCG 52685
Query 38229 ACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATC 38288
| || | ||| || || | |||| ||||||| ||| | || || |||
Sbjct 52684 GCCTGCAGCCCGGCGAGTTCGTGCACACCCTGGGCGACGCCCACCTCTATCTGAACCATG 52625
Query 38289 TGGAACAAGCGAAACTGCAGCTGACGCGCGAGCC 38322
| || || ||||| |||||||| | ||||||||
Sbjct 52624 TCGAGCAGGCGAAGCTGCAGCTCTCCCGCGAGCC 52591
>seq11739
Length=237542
Score = 98.7 bits (108), Expect = 3e-16
Identities = 171/249 (69%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGAC 37711
|||||| ||||||||| | || ||| | ||| |||| | |||| || |||| ||
Sbjct 9478 ATGAAAGCGTATTTAGACCTTCTACAACATATCCTAGACGATGGCGGTGACAAAGGTGAT 9419
Query 37712 CGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGAT 37771
|| || || || || | || || || || | || | || || |||| | |
Sbjct 9418 CGTACTGGTACAGGTACTCGTTCTGTATTTGGTCATCAAATGCGTTTTGACTTGTCAAAA 9359
Query 37772 GGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTT 37831
|| |||||||| | || || |||||| | ||| |||||||||| | |||||||||
Sbjct 9358 GGGTTTCCGCTACTAACCACTAAAAAAATTCATTTCCGCTCCATTGTGATTGAACTGCTG 9299
Query 37832 TGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGG 37891
||||| |||||||||| || ||||| | ||| | | || ||| || ||||||||
Sbjct 9298 TGGTTCCTAAAAGGCGACACCAACGTTCAATATCTTAAAGACAATAAAGTTTCGATTTGG 9239
Query 37892 GATGAGTGG 37900
||||| |||
Sbjct 9238 GATGAATGG 9230
>seq646
Length=687
Score = 93.3 bits (102), Expect = 1e-14
Identities = 129/178 (72%), Gaps = 2/178 (1%)
Strand=Plus/Minus
Query 38044 CGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCA 38103
||| |||||| || || | ||| ||||| ||||||||| ||||| | | |||||
Sbjct 436 CGCCTGGAATCCGGCCGATGTCGACAAGATGGCGCTGCCGCCCTGTCACTGCCTGTTTCA 377
Query 38104 GTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTT 38163
|||||| |||||||| |||||| |||| ||| | | |||||||| | ||| |||
Sbjct 376 GTTCTACGTCGCCAAGGGCCGGCTGTCCTGCCAGCTCTACCAGCGCTCGGCGGATGTGTT 317
Query 38164 TTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCAT-ATGGTAGCCCA 38220
| || |||| || ||||||||| ||| || ||| |||| ||| ||||| || ||
Sbjct 316 CCTCGGCGTGCCCTTCAACATCGCGTCCTATGCCCTGCTGAC-CATGATGGTCGCGCA 260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130616638220350
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