Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_031917.1
Length=39949
Score E
Sequences producing significant alignments: (Bits) Value
seq7305 149 2e-31
>seq7305
Length=28244
Score = 149 bits (164), Expect = 2e-31
Identities = 165/214 (77%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 38658 GTTTCAACATCATATCGTGGTGATACCCTGCAATCATTGCACGTTTCTGAGTTTGGCAAG 38717
|||||||| |||| ||||||| || || | ||||| ||||| || ||||| |||
Sbjct 22583 GTTTCAACTTCATTCCGTGGTGGAACGCTATACAGCTTGCATGTTTCAGAATTTGGGAAG 22524
Query 38718 ATATGTAAAAAGTATCCCGATAAAGCAAAAGAGATTGTTACTGGTGCATTTGAAGCTGTA 38777
|| ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 22523 ATTTGTGCAAAGCATCCTGATAAAGCAAAAGAGATTGTTACTGGTGCATTTGAAGCTGT- 22465
Query 38778 CCCGCTGATGGTGGTGTAATTACCCTTGAGTCTACCGCGGAGGGTAAAGAG-GGTTATTT 38836
|| || ||||||| ||||| ||||| ||| || || || | || ||||||||
Sbjct 22464 TCCACT--TGGTGGTCGGATTACTCTTGAAAGTACTGCAGAAGG-ACGCAGTGGTTATTT 22408
Query 38837 CTATAAGTACAGCGAAGAAGCTAGAAAACTTAAA 38870
|||| | || || |||| ||| ||||| |||||
Sbjct 22407 CTATCAATATTGCCAAGACGCT-GAAAAGTTAAA 22375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127692361249538
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |