Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_031922.1
Length=174830
Score E
Sequences producing significant alignments: (Bits) Value
seq9429 152 6e-32
>seq9429
Length=202388
Score = 152 bits (168), Expect = 6e-32
Identities = 296/432 (69%), Gaps = 19/432 (4%)
Strand=Plus/Plus
Query 146805 GCTTTGATGAAGTCTATCAATTTGCTGCAGACATGGGTGGCGCAGGTTACATCTTTACTG 146864
||||||| || || ||||| | || || || ||||| || || ||||| || ||||| |
Sbjct 3103 GCTTTGACGAGGTTTATCAGCTCGCAGCGGATATGGGCGGTGCCGGTTATATTTTTACCG 3162
Query 146865 ATGAACACTCTGCAGACATCATGCATAATTCTGCCACAATCAATCTAAATCTTTTGGATG 146924
|||||| || ||||| |||||||| ||||| || || || || ||| | || |
Sbjct 3163 GCGAACACGACGCCGACATAATGCATAACTCTGCGACGATTAACCTCAATATCGCTGACG 3222
Query 146925 CGATTGTGAAGACCAAAGGTATGGGACGTAAAGTTCCTAAGATTTTCTATTCATCTTCTG 146984
||| | ||| |||||| | ||| |||||||||| || || |
Sbjct 3223 ---TTGCCAG----AAA--------ACGTAATATCAAAAAGGTTTTCTATTCGTCGTCCG 3267
Query 146985 CTTGCATTTATCCTTC-TACAATCCAAGAAGATACGGATAATCCTGGTTTGC-GTGAAGA 147042
| ||||| ||||| | || |||| | ||||| | |||||||| | |||| |||||||
Sbjct 3268 CCTGCATGTATCCAGCGTATAATC-AGGAAGACCCAGATAATCC-GAATTGCAGTGAAGA 3325
Query 147043 GTATGCATATCCAGCTAACCCAGACTCTGAATATGGATGGGAAAAACTTTTCTCTGAAAG 147102
|| || ||||| || || |||||||||||||| |||||||| || ||||| || |
Sbjct 3326 GTCGGCTTATCCCGCAGCGCCTGACTCTGAATATGGTTGGGAAAAGCTGTTCTCGGAGCG 3385
Query 147103 ACTTTATCTTGCATACGGGCGTAACTACAATCTGGATATTAGGATTGCTCGTTACCATAA 147162
| ||||| || || || |||||| ||| | || | ||| | || |||||
Sbjct 3386 TTTGTATCTCGCTTATAACCGCAACTACGGCATGGCGAACCGGGTGGCTAGATATCATAA 3445
Query 147163 CATTTATGGACCTGAAGGAACCTGGGACGGTGGAAAGGAGAAAGCTCCCGCAGCTATGTG 147222
|||| ||| || || || || ||| | || ||||| || || |||||||| || | ||
Sbjct 3446 TATTTTTGGCCCAGAGGGGACGTGGCAGGGCGGAAAAGAAAAGGCTCCCGCGGCAGTCTG 3505
Query 147223 TCGAAAGGTTGC 147234
|| ||||| ||
Sbjct 3506 CCGTAAGGTGGC 3517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559222713495600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |