Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2118 102 1e-19 >seq2118 Length=284119 Score = 102 bits (112), Expect = 1e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64 ||||||||||||| || ||| ||| | ||| ||||| || || ||| |||||| ||| | Sbjct 251796 AAAGGGCAGGGACTTAATCACCGCAAACTT-ATGACCTGCACTCACTGGGAATT-CCTTG 251853 Query 65 TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATTACCC 123 || | | | |||||| || |||||||||||| || || || | ||||| Sbjct 251854 TTCATGGGTAGTAATTGCTATCCCTGGTCCCCATCACGAATGGGGTTCCATGGGTTACCG 251913 Query 124 GGACCTGTCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGC 181 | |||| ||| | || ||| || || ||| | ||||||| | |||||| || Sbjct 251914 GAGCCTGCTGGCGTA--TGCTAGGCACACGCTGAGCCCGCCAGTGTATCTTGCGTGCAGC 251971 Query 182 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 || ||||| ||||||||||| |||||||||||||| ||||| || ||||| Sbjct 251972 CCCGAACAGCTAAGGGCATCGCAGACCTGTTATTG-CTCAATCTCGGGTGGC 252022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751914685365