Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30]
11,711 sequences; 2,280,727,784 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2192 98.7 2e-18
seq11543 95.1 2e-17
seq2118 93.3 7e-17
>seq2192
Length=273845
Score = 98.7 bits (108), Expect = 2e-18
Identities = 92/116 (79%), Gaps = 7/116 (6%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | ||||| |||| ||| ||||||||||||||||| ||||| |
Sbjct 244611 CTAGTTAGCATGCCAGAGTCTCATTCGGTATAGGAATTAACCAGACAAACGTTTCCACTA 244670
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
| |||||| ||||| |||||||| |||||||||||||||||||||| ||||
Sbjct 244671 ATTAAGAA------TGCAC-ACCACCCACAGAATCAAGAAAGAGCTATCAACCTGT 244719
>seq11543
Length=868531
Score = 95.1 bits (104), Expect = 2e-17
Identities = 83/101 (82%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||||| ||||| ||| | |||||||||| |||||||||||||||||| ||
Sbjct 156981 GTCAGTGTAGCGTGCGTGTAGCCATGGACATCTAAGGTAATCACAGACCTGTTATTG-CT 156923
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||| | || |||||| | |||| | ||||||||||||||
Sbjct 156922 CAATC-TCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 156883
>seq2118
Length=284119
Score = 93.3 bits (102), Expect = 7e-17
Identities = 84/103 (82%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72
||| ||||||| | |||||| |||| ||||| ||||||||||| ||||||||||||||
Sbjct 251948 CCGCCAGTGTATCTTGCGTGCAGCCCCGAACAGCTAAGGGCATCGCAGACCTGTTATTG- 252006
Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||| | || |||||| | |||| | |||| |||||||||
Sbjct 252007 CTCAATC-TCGGGTGGCTGAATGCCACTTGTCCTTCTAAGAAG 252048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796709602791
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |