Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30]
11,711 sequences; 2,280,727,784 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1197 176 8e-42
seq4902 116 6e-24
seq6807 104 4e-20
seq11566 95.1 2e-17
>seq1197
Length=403637
Score = 176 bits (194), Expect = 8e-42
Identities = 206/275 (75%), Gaps = 15/275 (5%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||||| ||||| |||||||||| ||||| || |||||||||||||||||
Sbjct 354689 TCATCAGTAGGGTGAAACTCACCTGTCTCACGACGGAGAAATCCCAGCTCACGTTCCCTG 354630
Query 91 TTAGTGGGTGAACAATCCAACGCTT----ACCGAATTCTGCTTCGGT-----ATGATAGG 141
|||||||||||||||||||| |||| | | || ||||| ||| ||||||||
Sbjct 354629 TTAGTGGGTGAACAATCCAATGCTTGGTAAACCAA---TGCTT-GGTAAACAATGATAGG 354574
Query 142 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201
||||||| | | ||||| ||||||| | |||||||||| |||| | |||||||
Sbjct 354573 AAGAGCCAATGGCAAAGGACGGAAAAGCAGCATCGCTATGAATGCTTCGTCACCACAAGT 354514
Query 202 CAGTTA--TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAA 259
|||||| | || ||| |||||||||| |||||| | | ||| | | || | |
Sbjct 354513 CAGTTATGTAGCTCTGGGAACTTTTCTGACACCTCCTACTTAAAACTCAAAAGGTCAGGA 354454
Query 260 GGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
||| | ||||| |||||||| || ||||||||
Sbjct 354453 GGACTGTGAGGCCCCACTTTCACAGTCTGTATTCA 354419
>seq4902
Length=121106
Score = 116 bits (128), Expect = 6e-24
Identities = 148/198 (75%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||| ||||||||| | ||||| | || || | |||| ||||| ||| ||
Sbjct 7377 TCATCAGTCAGGTAAAACTGTTTTATCTCACAATGGCCTGATCCCACCTCACATTCT-TA 7435
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||| | ||||||||||||| || | |||||||| || || ||||||| ||
Sbjct 7436 TTAGTAGTTGAACAATCCAACACTGGGTAAGGTCTGCTTC---ATAAT--GAAGAGCTGA 7490
Query 151 CATCGAAGGATCAAAAAGCA-ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||| ||||| ||||||| | || ||||||||| |||||| |||| ||||||||
Sbjct 7491 TATCTAAGGACTGAAAAGCAGAAGT-GCTATGAACACTTGGCCAACACATTGCAGTTATC 7549
Query 210 CCTGTGGTAACTTTTCTG 227
| ||||||||||||||||
Sbjct 7550 CTTGTGGTAACTTTTCTG 7567
>seq6807
Length=58649
Score = 104 bits (114), Expect = 4e-20
Identities = 79/92 (86%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 16898 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 16957
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||| |||||||||||||||||||||||||
Sbjct 16958 ATGACCATCTAAACCCAGCTCACGTTCCCTAT 16989
>seq11566
Length=2013597
Score = 95.1 bits (104), Expect = 2e-17
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164
||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 442017 ATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAAGATCAA 441958
Query 165 AAAGCAACGTCG 176
||||| ||||||
Sbjct 441957 AAAGCGACGTCG 441946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854299941216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |