Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30]
11,711 sequences; 2,280,727,784 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq2118 107 4e-21
seq11543 77.0 6e-12
>seq2118
Length=284119
Score = 107 bits (118), Expect = 4e-21
Identities = 179/255 (70%), Gaps = 3/255 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||| |||| | ||| | |||| || | ||||| |||||||||||||| |
Sbjct 252048 CTTCTTAGAAGGACAAGTGGCATTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGCG 251991
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||| ||||| |||| |||||| | ||||||| | | || || || | |
Sbjct 251990 ATGCCCTTAGCTGTTCGGGGCTGCACGCAAGATACACTGGCGGGCTCAGCGTGTGCCTAG 251931
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
| | ||| | ||| ||||| | || | | ||||| |||||| | || |
Sbjct 251930 CATACGCCAGCAGGCTCCGGTAACCCATGGAACCCCATTCGTGATGGGGACCAGGGATAG 251871
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||| | | | | ||| |||||| || ||| || || ||||| || ||| |||||
Sbjct 251870 CAATTACTACCCATGAACAAGGAATTCCCAGTGAGTGCAGGTCATAAGTTTGCGGTGATT 251811
Query 311 ACGTCCCTGCCCTTT 325
| |||||||||||||
Sbjct 251810 AAGTCCCTGCCCTTT 251796
>seq11543
Length=868531
Score = 77.0 bits (84), Expect = 6e-12
Identities = 80/101 (79%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 156883 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 156940
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|| |||||||||| | ||| ||||| ||||||||||||
Sbjct 156941 ATTACCTTAGATGTCCATGGCTACACGCACGCTACACTGAC 156981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947089073408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |